Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0211
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 143 1e-34
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 143 1e-34
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 142 3e-34
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 142 3e-34
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 114 6e-26
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 77 9e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 67 1e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 56 3e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 4e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 4e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 55 5e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 53 2e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 53 2e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 52 4e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 52 4e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 52 4e-07
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 8e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 8e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 8e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 47 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 47 1e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 47 1e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 44 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 4e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 4e-04
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 40 0.001
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.009
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.009
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 35 0.063
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 30 1.8
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 29 2.4
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 29 4.1
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 4.1
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 5.4
Z82053-10|CAB04838.2| 278|Caenorhabditis elegans Hypothetical p... 28 7.2
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 7.2
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 143 bits (346), Expect = 1e-34
Identities = 65/105 (61%), Positives = 84/105 (80%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVD
Sbjct: 220 FMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVD 279
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
WLT+ M +FTVS+MHGDM+ F G++RVLI+TD+
Sbjct: 280 WLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDV 324
Score = 102 bits (245), Expect = 2e-22
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
EDIR+L+ G HVV GTPGRV+DMI R L IKL VLDEADEML++GFK+Q+ +++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 196 LSADVQVILLSATMPDDVLE 255
L QV+LLSAT+P ++LE
Sbjct: 196 LPPGAQVVLLSATLPHEILE 215
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 143 bits (346), Expect = 1e-34
Identities = 65/105 (61%), Positives = 84/105 (80%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVD
Sbjct: 220 FMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVD 279
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
WLT+ M +FTVS+MHGDM+ F G++RVLI+TD+
Sbjct: 280 WLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDV 324
Score = 102 bits (245), Expect = 2e-22
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
EDIR+L+ G HVV GTPGRV+DMI R L IKL VLDEADEML++GFK+Q+ +++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 196 LSADVQVILLSATMPDDVLE 255
L QV+LLSAT+P ++LE
Sbjct: 196 LPPGAQVVLLSATLPHEILE 215
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 142 bits (343), Expect = 3e-34
Identities = 67/112 (59%), Positives = 84/112 (75%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCN
Sbjct: 217 LDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCN 276
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
TRRKVD LTE M FTVS +HGDMD F GSSRVLITTD+L
Sbjct: 277 TRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDIL 328
Score = 123 bits (296), Expect = 1e-28
Identities = 64/129 (49%), Positives = 84/129 (65%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
VR+D R+LE+G+HVVVGTPGRV DMI AL + IK+FVLDEADEMLSRGFKDQI VF
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVF 196
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSW 369
+ + DVQV+LLSATMP +VL+ + L ++ L + + F +N + W
Sbjct: 197 RSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQF--YINVQKDEW 254
Query: 370 KLCVTCMIH 396
K C ++
Sbjct: 255 KFDCLCDLY 263
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 142 bits (343), Expect = 3e-34
Identities = 67/112 (59%), Positives = 84/112 (75%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCN
Sbjct: 217 LDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCN 276
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
TRRKVD LTE M FTVS +HGDMD F GSSRVLITTD+L
Sbjct: 277 TRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDIL 328
Score = 123 bits (296), Expect = 1e-28
Identities = 64/129 (49%), Positives = 84/129 (65%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
VR+D R+LE+G+HVVVGTPGRV DMI AL + IK+FVLDEADEMLSRGFKDQI VF
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVF 196
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSW 369
+ + DVQV+LLSATMP +VL+ + L ++ L + + F +N + W
Sbjct: 197 RSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQF--YINVQKDEW 254
Query: 370 KLCVTCMIH 396
K C ++
Sbjct: 255 KFDCLCDLY 263
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 114 bits (274), Expect = 6e-26
Identities = 56/112 (50%), Positives = 76/112 (67%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ V+ FMRDP+RILV+K+ELTLEGI+QFYI ++ +EWK LCDL T QA+IFCN
Sbjct: 176 LDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCN 235
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
TRR+V LTE + VS HG+M++ + F ++RVL+TTDL+
Sbjct: 236 TRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLM 287
Score = 83.8 bits (198), Expect = 1e-16
Identities = 47/114 (41%), Positives = 66/114 (57%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
HV++GTP D ++ + IK+FVLDEADEMLS+GFKDQI VF+ + DVQV+LL
Sbjct: 111 HVLMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLL 167
Query: 226 SATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSWKLCVTC 387
SATMP +VL+ + L ++ L + + F +N + WK C
Sbjct: 168 SATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQF--YINVQKDEWKFNCLC 219
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ E + + G+H+VV TPGR+ DM+T + ++ + VLDEAD ML GF+D+I +F
Sbjct: 312 IGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIF 371
Query: 190 KMLSADVQVILLSATMP 240
A Q +L SATMP
Sbjct: 372 YFFKAQRQTLLFSATMP 388
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 411 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 470
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E+M R V +HGDM V + F G +VLITT++
Sbjct: 471 LYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNV 514
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX-RALHANTIKLFVLDEADEML-SRGFKDQIXXVFKML---SADVQ 213
+V+GTPG D + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 332 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQ 391
Query: 214 VILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQ 345
+L SAT + V+ + + + + +R+ + F +Q
Sbjct: 392 SMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 435
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 436 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 495
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E+M R V +HGDM V + F G +VLITT++
Sbjct: 496 LYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNV 539
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX-RALHANTIKLFVLDEADEML-SRGFKDQIXXVFKML---SADVQ 213
+V+GTPG D + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 357 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQ 416
Query: 214 VILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQ 345
+L SAT + V+ + + + + +R+ + F +Q
Sbjct: 417 SMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 460
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 820 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 879
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E+M R V +HGDM V + F G +VLITT++
Sbjct: 880 LYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNV 923
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX-RALHANTIKLFVLDEADEML-SRGFKDQIXXVFKML---SADVQ 213
+V+GTPG D + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 741 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQ 800
Query: 214 VILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQ 345
+L SAT + V+ + + + + +R+ + F +Q
Sbjct: 801 SMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 844
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R+DI +L VH+V+ TPGR+ D++ K VLDEAD++LS+ F+ + +
Sbjct: 150 DLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRL 209
Query: 187 FKMLSADVQVILLSATMPDDVLEYL 261
L + QV+L SAT P+ V ++
Sbjct: 210 INFLPKERQVMLYSATFPNTVTSFM 234
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
M P I + EELTL G+ Q+Y ++ E+ K+ L L+ L I Q++IFCN+ ++V+
Sbjct: 238 MHKPYEINLM-EELTLLGVTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVEL 295
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
L + + ++ +H M F G+ R L+ +DLL
Sbjct: 296 LAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLL 340
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R LE GV +VV TPGR+ D + + VLDEAD ML GF+ QI + +
Sbjct: 247 RDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRP 306
Query: 205 DVQVILLSATMPDDV 249
D Q ++ SAT P +V
Sbjct: 307 DRQTLMFSATWPKEV 321
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 408 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ +IF T+RK D LT +M + +HGD + F G + +++ TD+
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDV 435
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMI---TXRALHANTIKLFVLDEADEMLSRGFKDQIX 180
+ E I L+ G +VV TPGR+ D++ + + + + VLDEAD M +GF+ QI
Sbjct: 417 ISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIM 476
Query: 181 XVFKMLSADVQVILLSATMP 240
V + D Q +L SAT P
Sbjct: 477 KVVNNIRPDKQTVLFSATFP 496
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXR----ALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R+L HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+
Sbjct: 202 RELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFE 261
Query: 193 MLSADVQVILLSATMPDDV 249
+S Q +LLSAT+ +++
Sbjct: 262 SISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXR----ALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R+L HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+
Sbjct: 202 RELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFE 261
Query: 193 MLSADVQVILLSATMPDDV 249
+S Q +LLSAT+ +++
Sbjct: 262 SISEKRQTLLLSATITNNI 280
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E + GV +V+ TPGR+ D+ + ++ VLDEAD ML GF+ I +
Sbjct: 204 EQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFE 263
Query: 196 LSADVQVILLSATMPDDVLEYLD 264
+ D V L SAT P+ V + D
Sbjct: 264 IRPDRLVALTSATWPEGVRKLTD 286
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ E + +++ TPGR+ +I L + ++ V DEAD + GF+DQ+
Sbjct: 132 QIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTET 191
Query: 187 FKMLSADVQVILLSATMPDDVLEYLDA 267
K + Q +L SAT+P ++++ A
Sbjct: 192 LKRIPESRQTLLFSATLPKMLVDFAKA 218
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/113 (19%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEE--WKLETLCDLYDTLSIAQAVIF 422
+ ++ + DP+ + + +E + + + +E + L LC D + Q V+F
Sbjct: 213 VDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDREN-KQTVVF 271
Query: 423 CNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
C T + V+++ +H S ++ +D + K + F + +L+ TD+
Sbjct: 272 CATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDV 324
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ E + +++ TPGR+ +I L + ++ V DEAD + GF+DQ+
Sbjct: 132 QIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTET 191
Query: 187 FKMLSADVQVILLSATMPDDVLEYLDA 267
K + Q +L SAT+P ++++ A
Sbjct: 192 LKRIPESRQTLLFSATLPKMLVDFAKA 218
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/113 (19%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEE--WKLETLCDLYDTLSIAQAVIF 422
+ ++ + DP+ + + +E + + + +E + L LC D + Q V+F
Sbjct: 213 VDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDREN-KQTVVF 271
Query: 423 CNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
C T + V+++ +H S ++ +D + K + F + +L+ TD+
Sbjct: 272 CATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDV 324
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +1
Query: 49 VVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILLS 228
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I + L QV + S
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFS 202
Query: 229 ATMP 240
AT P
Sbjct: 203 ATYP 206
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/105 (20%), Positives = 47/105 (44%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+RD + +++ L GIKQ+ +A LE L + ++ QA++FC+ K +
Sbjct: 216 FLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCE 273
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + V+ + M + + ++L+++DL
Sbjct: 274 PIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDL 318
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +1
Query: 49 VVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILLS 228
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I + L QV + S
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFS 202
Query: 229 ATMP 240
AT P
Sbjct: 203 ATYP 206
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/105 (20%), Positives = 47/105 (44%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+RD + +++ L GIKQ+ +A LE L + ++ QA++FC+ K +
Sbjct: 216 FLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCE 273
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + V+ + M + + ++L+++DL
Sbjct: 274 PIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDL 318
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 SGVHVVVGTPGRVYDMITXRA-LHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQ 213
SG++++V TPGR+ + A + +++++ VLDEAD ML GF Q+ + L A+ Q
Sbjct: 196 SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQ 255
Query: 214 VILLSATMPDDV 249
+L SAT +V
Sbjct: 256 TLLFSATQTRNV 267
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
LE HVVV TPG++ M + R + + V+DEAD +LS G+++++ + L
Sbjct: 143 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 202
Query: 211 QVILLSATMPDDV 249
Q ++ SAT+ DD+
Sbjct: 203 QCLMTSATLKDDM 215
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
LE HVVV TPG++ M + R + + V+DEAD +LS G+++++ + L
Sbjct: 210 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 269
Query: 211 QVILLSATMPDDV 249
Q ++ SAT+ DD+
Sbjct: 270 QCLMTSATLKDDM 282
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 10 VREDIRQLESGV-HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXX 183
+++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ + +
Sbjct: 150 IKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQE 209
Query: 184 VFKMLSADVQVILLSATMPDDV 249
+ KM QV++ SAT+P ++
Sbjct: 210 IVKMTPQQKQVMMFSATLPKEL 231
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 10 VREDIRQLESGV-HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXX 183
+++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ + +
Sbjct: 150 IKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQE 209
Query: 184 VFKMLSADVQVILLSATMPDDV 249
+ KM QV++ SAT+P ++
Sbjct: 210 IVKMTPQQKQVMMFSATLPKEL 231
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 431
V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF
Sbjct: 234 VCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKA 292
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
++ + L + + ++F A+H M +F R+L+ TDL G
Sbjct: 293 VKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFG 344
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF- 189
++ I +L G H+++ TPGR+ D++ + + VLDEAD ML GF+ QI +
Sbjct: 292 KDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVE 351
Query: 190 --KMLSADVQV-ILLSATMPDDV 249
+M S + ++ + SAT P ++
Sbjct: 352 CNRMPSKEERITAMFSATFPKEI 374
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 312 TLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVS 488
T E I Q + +E +E K L DL D T + ++F T+R L ++ +++ V
Sbjct: 397 TSENIMQKIVWVEEDE-KRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVV 455
Query: 489 AMHGDMDNVSVK*S*GSFVLGSSRVLITT 575
+HGD+ + F G++ +L+ T
Sbjct: 456 TIHGDLKQFEREKHLDLFRTGTAPILVAT 484
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 431
V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF
Sbjct: 226 VCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKA 284
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
++ + L + + ++F A+H M +F R+L+ TDL G
Sbjct: 285 VKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFG 336
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 VREDIRQLESGV-HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ G D V
Sbjct: 149 IKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDV 206
Query: 187 FKMLSADVQVILLSATMPDDV 249
++ QV++ SAT+P ++
Sbjct: 207 QEI----KQVMMFSATLPKEL 223
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
R+ + +L +G H+++ TPGR+ D+I + + VLDEAD ML GF+ QI +
Sbjct: 264 RDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
R+ + +L +G H+++ TPGR+ D+I + + VLDEAD ML GF+ QI +
Sbjct: 248 RDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
R+ + +L +G H+++ TPGR+ D+I + + VLDEAD ML GF+ QI +
Sbjct: 245 RDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 302
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 13 REDI-RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
RED +L GV VV+ TPGR+ D++ R L N +LDEAD ML GF+ + V
Sbjct: 418 REDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVL 477
Query: 190 KML 198
+ +
Sbjct: 478 EYM 480
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/111 (19%), Positives = 52/111 (46%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R ++R P + + E ++Q + E+ K + L ++ ++ +IF N +
Sbjct: 525 LARQYLRRPAVVHIGSAGKPTERVEQVVYMVP-EDRKRKKLVEVLESQFQPPIIIFVNQK 583
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
+ D L++ + F + +HG + + + G+S +L+ TD+ G
Sbjct: 584 KGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAG 634
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 46 HVVVGTPGRVYDMI-TXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVIL 222
H++V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + K++ + + L
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYL 223
Query: 223 LSATMPDDV 249
SATM V
Sbjct: 224 FSATMTKKV 232
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/109 (23%), Positives = 46/109 (42%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+ R +RDP R+ V T++ +KQ YI + ++K L L + + A++FC T
Sbjct: 235 LERASLRDPARVSVSSRYKTVDNLKQHYIFVP-NKYKETYLVYLLNEHAGNSAIVFCATC 293
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + +HG M S F + +L+ TD+
Sbjct: 294 ATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDV 342
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 EDIRQLES-GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
E +L++ G +VV TPGR+ D++ A + V DEAD M GF+ Q+ +
Sbjct: 380 EQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISD 439
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q ++ SAT V
Sbjct: 440 HVRPDRQCLMFSATFKQKV 458
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLC-DLYDTLSIAQAVIFCNT 431
++R + DPVRI+ + I+Q ++ ++ KL L +L + S+ + +IF
Sbjct: 461 LARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTK 520
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDM 506
+ + + + + ++DF + +HGDM
Sbjct: 521 KLDSEDVAKKLKMKDFDIVLLHGDM 545
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 735 PKKENRQTLMFSATFPDSVQE 755
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 735 PKKENRQTLMFSATFPDSVQE 755
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 735 PKKENRQTLMFSATFPDSVQE 755
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 524 PRKENRQTLMFSATFPDSVQE 544
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 524 PRKENRQTLMFSATFPDSVQE 544
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLS- 201
Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I + S
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 202 ---ADVQVILLSATMPDDVLE 255
+ Q ++ SAT PD V E
Sbjct: 524 PRKENRQTLMFSATFPDSVQE 544
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLS--RGFKDQIXXVFKM 195
+R LE+G +VVGTP RV+D+I L ++ V+DE D+ L+ QI +F++
Sbjct: 328 LRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRV 387
Query: 196 L------SADVQVILLSATMPD-DVLEYLD 264
L QVI SAT+ + +V + D
Sbjct: 388 LPLVAQDGTRRQVIACSATLHNFEVCRFAD 417
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 396 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITT 575
L + +A++FC T+++ D + + + + + +HGD + S F G R L+ +
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCS 562
Query: 576 DLL 584
D++
Sbjct: 563 DVV 565
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMI--TXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+L GV ++V TPGR+ D + T L N +K ++DEAD +L GF+ ++ V + L
Sbjct: 186 KLAKGVSILVATPGRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLP 244
Query: 202 ADVQVILLSAT 234
Q +L SAT
Sbjct: 245 KQRQSMLFSAT 255
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 37 SGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQV 216
S + V TP + + ++ VLDEAD ML F+DQ+ + ++ + + Q
Sbjct: 293 SNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQT 352
Query: 217 ILLSATMPDDVLE 255
+L SATM +++ E
Sbjct: 353 LLFSATMTEEIDE 365
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXV--FKML 198
Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I + +K +
Sbjct: 421 QIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNM 480
Query: 199 SAD--VQVILLSATMPDDVLE 255
+ Q ++ SAT P V E
Sbjct: 481 PKNDKRQTMMFSATFPSSVQE 501
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXV--FKML 198
Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I + +K +
Sbjct: 421 QIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNM 480
Query: 199 SAD--VQVILLSATMPDDVLE 255
+ Q ++ SAT P V E
Sbjct: 481 PKNDKRQTMMFSATFPSSVQE 501
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +3
Query: 477 FTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
FTVS +HGDMD F GSSRVLITTD+L
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDIL 41
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 EVREDIRQLES-GVHVVVGTPGRVYDMI----TXRALHANTIKLFVLDEADEMLSRGFKD 171
+V ++I+ ++ V+++V TPGR++ +I T A T++L V+DEAD F+D
Sbjct: 119 KVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFED 178
Query: 172 QIXXVFKMLSADVQVILLSAT 234
+ + + + L SAT
Sbjct: 179 HMREILSCIPKQRRTGLFSAT 199
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 SGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLSADV- 210
S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 865 SQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQ 924
Query: 211 QVILLSATMPDDV 249
Q +L SA+ +D+
Sbjct: 925 QTVLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 37 SGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLSADV- 210
S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 865 SQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQ 924
Query: 211 QVILLSATMPDDV 249
Q +L SA+ +D+
Sbjct: 925 QTVLFSASFSEDL 937
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 34.7 bits (76), Expect = 0.063
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV----- 186
+ ++ +G +++GT GR+ D + ++ V DEAD +L KD + +
Sbjct: 503 LNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIK 562
Query: 187 ---FKMLSADVQVILLSATMPDDVLEYLDAL 270
F +A Q I+ SAT V+ + L
Sbjct: 563 DAGFMESAATRQTIMTSATFNASVMTVANEL 593
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Frame = +1
Query: 49 VVVGTPGRVYDMI----TXRAL-HANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD-- 207
+VV TPGR++ M+ T L +K V+DE D M+ G+ ++ + + +
Sbjct: 122 IVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESE 181
Query: 208 ---VQVILLSATM 237
+Q ++ SAT+
Sbjct: 182 KEKLQTLVFSATL 194
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Frame = +1
Query: 49 VVVGTPGRVYDMI----TXRAL-HANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD-- 207
+VV TPGR++ M+ T L +K V+DE D M+ G+ ++ + + +
Sbjct: 289 IVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESE 348
Query: 208 ---VQVILLSATM 237
+Q ++ SAT+
Sbjct: 349 KEKLQTLVFSATL 361
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 312 TLEGIKQFYIA-IEL-EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 461
T+ GI F + + L + KLETLCD+ D + +IFC ++ + S
Sbjct: 115 TMHGISGFDLTTVPLYHQSKLETLCDIIDNCKL--EIIFCENAKRAEGFLSS 164
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 386 QVTQSFQLPFF*FNCNVKLFNTFQ 315
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 386 QVTQSFQLPFF*FNCNVKLFNTFQ 315
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 TPGRVYDMITXRALHANTIKLFVLDEADEMLSRG-FKDQIXXVFKMLSADV 210
T G++ I + + + +K+ +LDE+D+M+ F + I V L DV
Sbjct: 229 TMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDV 279
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 281 RISHKASRYSNTSSGMVAESNMT*TSADNILKTXWIWSLKPLDNIS 144
R+ + R TSSG +A+SN+ T ++ + S+ P DN S
Sbjct: 34 RLGREPKRIFGTSSGNMADSNLEETCLEHDSRPSSASSITPADNTS 79
>Z82053-10|CAB04838.2| 278|Caenorhabditis elegans Hypothetical
protein T26E3.8 protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 163 FKDQIXXVFKMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTL 342
F+D+I +FK + I ++ +DV + L+ L + Y + R S + ++ T
Sbjct: 91 FRDKISYIFKCVKVYRYDIEVNHRREEDVRQILNILRSVRYCTI-SRMSYTNQRISGETF 149
Query: 343 QLN*KNGSWK 372
QL + GSW+
Sbjct: 150 QLFARLGSWR 159
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 109 WHEAHXXLSYHIHDLECPPPHEHHSPVGE 23
+H+AH + H CPPPH P+GE
Sbjct: 25 FHKAH--IDPHALAQTCPPPHGGEMPLGE 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,269,848
Number of Sequences: 27780
Number of extensions: 370247
Number of successful extensions: 950
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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