Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0209
         (626 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_Q8IJT2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 3018

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -1

Query: 455  SIESLKVLNLSKIISLIRLQS*YRHCDCIYTFHIQLHYNLHSNNSLIEYI 306
            +I SL ++N+   I +  ++  Y    CIY  ++ L YN+ S+  L+ Y+
Sbjct: 2204 NISSLYMINIQNYIGIYDIRKYY----CIYFLYLSLKYNIMSSQGLLHYL 2249


>UniRef50_Q8IJT2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 587

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = -1

Query: 500 IEKNLN*FHYILKLKSIESLKVLNLSKIISLIRLQS*YRHCDCIYTFHIQLHYNLHSNNS 321
           I K+++   YILK  SI   K  N     ++I L++   + D     +I ++YN+H+   
Sbjct: 301 INKSISKIKYILKYDSIFYFKKNNTLLKNNIINLKNPEEYNDLFQIINILVYYNIHNYKI 360

Query: 320 LIEYIINKKQFIDF 279
           ++E    +   IDF
Sbjct: 361 VLEPKEKENLNIDF 374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,928,811
Number of Sequences: 1657284
Number of extensions: 8663328
Number of successful extensions: 17913
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17902
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)