Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0209
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.4  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   6.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 101 IIFCCLAYRSGFEAIE 54
           I + CLAY  GF  +E
Sbjct: 436 IFYYCLAYNGGFVPLE 451


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 506 IEIEKNLN*FHYILKLKSIESLKVLNLSK 420
           +E+EK  +  HY+ + + IE    L L++
Sbjct: 236 LELEKEFHTNHYLTRRRRIEMAHALCLTE 264


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 506 IEIEKNLN*FHYILKLKSIESLKVLNLSK 420
           +E+EK  +  HY+ + + IE    L L++
Sbjct: 18  LELEKEFHTNHYLTRRRRIEMAHALCLTE 46


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 506 IEIEKNLN*FHYILKLKSIESLKVLNLSK 420
           +E+EK  +  HY+ + + IE    L L++
Sbjct: 19  LELEKEFHFNHYLTRRRRIEIAHALCLTE 47


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 506 IEIEKNLN*FHYILKLKSIESLKVLNLSK 420
           +E+EK  +  HY+ + + IE    L L++
Sbjct: 170 LELEKEFHFNHYLTRRRRIEIAHALCLTE 198


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 506 IEIEKNLN*FHYILKLKSIESLKVLNLSK 420
           +E+EK  +  HY+ + + IE    L L++
Sbjct: 229 LELEKEFHFNHYLTRRRRIEIAHALCLTE 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,795
Number of Sequences: 336
Number of extensions: 2611
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)