Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0205
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.11
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.11
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.25
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 31 0.43
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 31 0.43
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 31 0.57
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.57
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 30 1.3
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 30 1.3
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 30 1.3
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 29 3.1
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 29 3.1
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 28 4.0
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 28 4.0
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 4.0
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.3
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.3
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.3
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 5.3
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 7.0
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 7.0
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 7.0
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 7.0
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 7.0
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 27 7.0
Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical pr... 27 9.3
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 9.3
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 9.3
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASP-QRSQSPKPTDEHFVKVPVH 198
P + ++ +P KT + P ++K+ PQT + ASP ++ +SP+ + VK P
Sbjct: 1666 PTSPTKKESSPTKKTDDEVKSPTKKEKS-PQTVEEKPASPTKKEKSPEKSVVEEVKSPKE 1724
Query: 199 HETPKAE----PPSRAQKSPQQ 252
KAE P++ +KSP++
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEK 1746
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASP-QRSQSPKPTDEHFVKVPVH 198
P + ++ +P KT + P ++K+ PQT + ASP ++ +SP+ + VK P
Sbjct: 1666 PTSPTKKESSPTKKTDDEVKSPTKKEKS-PQTVEEKPASPTKKEKSPEKSVVEEVKSPKE 1724
Query: 199 HETPKAE----PPSRAQKSPQQ 252
KAE P++ +KSP++
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEK 1746
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASP-QRSQSPKPTDEHFVKVPVH 198
P + ++ +P KT + P ++K+ PQT + ASP ++ +SP+ + VK P
Sbjct: 1666 PTSPTKKESSPTKKTDDEVKSPTKKEKS-PQTVEEKPASPTKKEKSPEKSVVEEVKSPKE 1724
Query: 199 HETPKAE----PPSRAQKSPQQ 252
KAE P++ +KSP++
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEK 1746
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASP-QRSQSPKPTDEHFVKVPVH 198
P + ++ +P KT + P ++K+ PQT + ASP ++ +SP+ + VK P
Sbjct: 1666 PTSPTKKESSPTKKTDDEVKSPTKKEKS-PQTVEEKPASPTKKEKSPEKSVVEEVKSPKE 1724
Query: 199 HETPKAE----PPSRAQKSPQQ 252
KAE P++ +KSP++
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEK 1746
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 67 YRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSP 246
YR P+P +++ P + + S+S KP++ + H P PPS + P
Sbjct: 359 YRSAPKPAPRERIIPVSRQQPEIEQRNSRSMKPSEPDYNTYSTH---PPRPPPSSSMNYP 415
Query: 247 QQHNLH 264
N H
Sbjct: 416 SMSNTH 421
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 19 PPPNFSRSFGT-PFNKTYRQGPQPFVQQKAYPQTAFAR---GASPQRSQSPKPTDEHFVK 186
PP + S+ T P N PF Q + P ++A +PQ + P PT +V+
Sbjct: 65 PPTPPANSYATAPANYAAPSNAYPFAPQYSIPMNSYAMPKYAVAPQYAMVPYPTPPAYVR 124
Query: 187 VPVHHETP 210
P + TP
Sbjct: 125 PPPVYVTP 132
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 31.5 bits (68), Expect = 0.43
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
++E HP + RSF +Y QP + + + +P + S ++ +
Sbjct: 181 KNETVHPSTDGIRSFQQSPTSSYNDSAQPNYELSRTTYSPASHRPTPTKDYSDH-REKPY 239
Query: 181 VKVPVHHETPKAEPPSRAQKSPQ-QHN--LHRXSLLNNTSLRHRRAHSNNLHLNGNKLLR 351
H + + SR+ +S Q HN S +NT L +HS + +R
Sbjct: 240 NTATSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSPHFSSRAFNAVR 299
Query: 352 S--LKLNNHH 375
S + ++ HH
Sbjct: 300 SPVVSMDLHH 309
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 31.5 bits (68), Expect = 0.43
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
++E HP + RSF +Y QP + + + +P + S ++ +
Sbjct: 181 KNETVHPSTDGIRSFQQSPTSSYNDSAQPNYELSRTTYSPASHRPTPTKDYSDH-REKPY 239
Query: 181 VKVPVHHETPKAEPPSRAQKSPQ-QHN--LHRXSLLNNTSLRHRRAHSNNLHLNGNKLLR 351
H + + SR+ +S Q HN S +NT L +HS + +R
Sbjct: 240 NTATSHQSSERLNSESRSSRSSQLTHNPSFDYSSSNHNTKLEQPNSHSPHFSSRAFNAVR 299
Query: 352 S--LKLNNHH 375
S + ++ HH
Sbjct: 300 SPVVSMDLHH 309
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +1
Query: 73 QGPQPFVQQKAYPQTAFARGASPQRS----------QSPKPTDEHFVKVPVHHETPKAEP 222
+G + P T+F R + +RS +SPK +D+ V+ P+ TP P
Sbjct: 399 RGRSSSISSPCKPDTSFTRNSIGRRSVRTTSREKQQESPKSSDQA-VQHPLAASTPVRRP 457
Query: 223 PSRAQKSPQQHNLH 264
P + Q P Q +H
Sbjct: 458 PRQPQALPTQDEIH 471
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +1
Query: 73 QGPQPFVQQKAYPQTAFARGASPQRS----------QSPKPTDEHFVKVPVHHETPKAEP 222
+G + P T+F R + +RS +SPK +D+ V+ P+ TP P
Sbjct: 399 RGRSSSISSPCKPDTSFTRNSIGRRSVRTTSREKQQESPKSSDQA-VQHPLAASTPVRRP 457
Query: 223 PSRAQKSPQQHNLH 264
P + Q P Q +H
Sbjct: 458 PRQPQALPTQDEIH 471
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +1
Query: 73 QGPQPFVQQKAYPQTAFARGASPQRS----------QSPKPTDEHFVKVPVHHETPKAEP 222
+G + P T+F R + +RS +SPK +D+ V+ P+ TP P
Sbjct: 399 RGRSSSISSPCKPDTSFTRNSIGRRSVRTTSREKQQESPKSSDQA-VQHPLAASTPVRRP 457
Query: 223 PSRAQKSPQQHNLH 264
P + Q P Q +H
Sbjct: 458 PRQPQALPTQDEIH 471
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 79 PQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPS 228
P P YPQ A A Q+ P P H+ P H+ P P S
Sbjct: 108 PAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHS 157
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 PQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPV-HHETPKAEPPSRAQKSPQQH 255
PQ V A P + + A P + P P +H V P + + P PP P H
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH 147
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
+H N PP + + P N +++ Q + QQ A Q + A PQ Q P + +
Sbjct: 65 QHTNPQQPPQ--QQYNVPTN-SHQTAEQNYQQQWAQQQ--YQNQAQPQPPQQPSLSSQQI 119
Query: 181 VKVPVHHETPKAEPPSRAQKSPQQ 252
P + PKA+ + Q + QQ
Sbjct: 120 QHQP---QLPKAKKAPKVQTNTQQ 140
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
+H N PP + + P N +++ Q + QQ A Q + A PQ Q P + +
Sbjct: 65 QHTNPQQPPQ--QQYNVPTN-SHQTAEQNYQQQWAQQQ--YQNQAQPQPPQQPSLSSQQI 119
Query: 181 VKVPVHHETPKAEPPSRAQKSPQQ 252
P + PKA+ + Q + QQ
Sbjct: 120 QHQP---QLPKAKKAPKVQTNTQQ 140
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
+H N PP + + P N +++ Q + QQ A Q + A PQ Q P + +
Sbjct: 65 QHTNPQQPPQ--QQYNVPTN-SHQTAEQNYQQQWAQQQ--YQNQAQPQPPQQPSLSSQQI 119
Query: 181 VKVPVHHETPKAEPPSRAQKSPQQ 252
P + PKA+ + Q + QQ
Sbjct: 120 QHQP---QLPKAKKAPKVQTNTQQ 140
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF 180
+ + F P F + P + +Q Q F+ Q+ Y Q F PQ+ Q +P +
Sbjct: 40 QQQQFQQPQQFQQQ---PQFQQQQQNYQQFLAQQQY-QPQFQAQQQPQQPQYFQPQQQ-- 93
Query: 181 VKVPVHHETPKAEPPSRAQKSPQ 249
+ PV ++ + + P + Q+ PQ
Sbjct: 94 -QQPVQYQQQQPQQPLQYQQQPQ 115
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/102 (23%), Positives = 39/102 (38%)
Frame = +1
Query: 79 PQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHN 258
P+P P A + SP SP + ++ ++ + PP + P
Sbjct: 33 PRPSSSDSFGPSAAPSTSLSPP-FLSPSYSMDYIIEAMTSSSSTSPVPPPVSASRPVAPV 91
Query: 259 LHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNNHHPMI 384
+ R L + HRR HS+ HL + + L +HH I
Sbjct: 92 VARVEGLRAVPVGHRRQHSSPGHL--QQFQQELHARHHHANI 131
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 116 VCGYAFCCTKG*GP 75
+CGY F CTKG GP
Sbjct: 54 ICGYPFTCTKGPGP 67
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 PPPNFSRSFGT-PFNKTYRQGPQP-FVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVP 192
P P R+ G P + Y PQP QQ+ YPQ RG P+P + + P
Sbjct: 132 PQPYPQRTGGCLPSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQ--PQPP 189
Query: 193 VHHETPKAEPP 225
+ P EPP
Sbjct: 190 CYQRQP--EPP 198
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 PPPNFSRSFGT-PFNKTYRQGPQP-FVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVP 192
P P R+ G P + Y PQP QQ+ YPQ RG P+P + + P
Sbjct: 132 PQPYPQRTGGCLPSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQ--PQPP 189
Query: 193 VHHETPKAEPP 225
+ P EPP
Sbjct: 190 CYQRQP--EPP 198
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 PPPNFSRSFGT-PFNKTYRQGPQP-FVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVP 192
P P R+ G P + Y PQP QQ+ YPQ RG P+P + + P
Sbjct: 132 PQPYPQRTGGCLPSPRGYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQ--PQPP 189
Query: 193 VHHETPKAEPP 225
+ P EPP
Sbjct: 190 CYQRQP--EPP 198
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGA---SPQRSQSPKPTDEHFVKV 189
PPP SR P P +Q A AR A + Q +P PT + ++
Sbjct: 124 PPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQM 183
Query: 190 PVHHETPKAEPPSRAQK----SPQQHNLHRXSLLNNTSLRHRRAHSNNLHLNG 336
+ P A PP+ Q+ PQQ++ + + +++ ++++G
Sbjct: 184 APRPQAPAAYPPASQQQGYPPQPQQNSQYGQPQVPQPQMQNMNQQFGQMNMSG 236
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHH 201
PP+ S +P N+T PQP + YP PQ + + +PT + P
Sbjct: 179 PPSTSAPHSSPNNRTSLYNPQP-PPKTGYPTNPRVPYNPPQPNYTRQPTYPEDNRAPYKP 237
Query: 202 ETPKAEPPSR 231
PP R
Sbjct: 238 TRSPNTPPPR 247
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARG-----ASPQRSQSPKPTD 171
+N + PN+ ++ P + ++Q P+ + PQ + + P Q+P PT+
Sbjct: 216 QNPYQQPNYQQNQYQPQLQQFQQNPRQQQHVYSNPQQGYQQNYQNLYTPPPAQQAPIPTE 275
Query: 172 EHFVKVPVHHETPKAEPPSRAQKSPQ 249
+ + P H + P Q +PQ
Sbjct: 276 KTQIPRPPSHGSAWPTFPPHQQWTPQ 301
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARG-----ASPQRSQSPKPTD 171
+N + PN+ ++ P + ++Q P+ + PQ + + P Q+P PT+
Sbjct: 238 QNPYQQPNYQQNQYQPQLQQFQQNPRQQQHVYSNPQQGYQQNYQNLYTPPPAQQAPIPTE 297
Query: 172 EHFVKVPVHHETPKAEPPSRAQKSPQ 249
+ + P H + P Q +PQ
Sbjct: 298 KTQIPRPPSHGSAWPTFPPHQQWTPQ 323
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 106 YPQTA-FARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNL-HRXSLL 279
+P+T+ F GASP P D+H P H K PP SP NL HR + L
Sbjct: 132 FPETSKFMNGASP-------PKDKHHSWEPSIHHYDKQPPPDIQTNSPVFGNLNHRKNKL 184
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 370 HHPMIP*HKFSVFKPT 417
H PM+P FSVFKPT
Sbjct: 690 HFPMVPRKAFSVFKPT 705
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 106 YPQTA-FARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNL-HRXSLL 279
+P+T+ F GASP P D+H P H K PP SP NL HR + L
Sbjct: 132 FPETSKFMNGASP-------PKDKHHSWEPSIHHYDKQPPPDIQTNSPVFGNLNHRKNKL 184
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +1
Query: 46 GTPFNKTYRQGP---QPFVQQKAYPQTAFARGASPQRSQSPKPTDEHF--VKVPVHHETP 210
G P+ + +Q P Q QQ+ + Q PQ+ Q P+ +H VP+ H P
Sbjct: 486 GNPYAQQQQQHPMYAQYQQQQQQHAQHQQNMSGYPQQQQQPQHPHQHQQPASVPMQHH-P 544
Query: 211 KAEPPSRAQKSPQQHNLHRXS 273
+ + PS+ Q P Q S
Sbjct: 545 Q-QHPSQHQTQPNQQQQQHPS 564
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein
K07E12.1b protein.
Length = 12268
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 ARGASPQRSQSPKPTDE--HFVKVPVHHETPKAEP 222
A G + SP PTD H+V VPV T KA P
Sbjct: 10637 ASGKPLSKDGSPLPTDNDGHYVLVPVDDSTIKAFP 10671
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 ARGASPQRSQSPKPTDE--HFVKVPVHHETPKAEP 222
A G + SP PTD H+V VPV T KA P
Sbjct: 10682 ASGKPLSKDGSPLPTDNDGHYVLVPVDDSTIKAFP 10716
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 ARGASPQRSQSPKPTDE--HFVKVPVHHETPKAEP 222
A G + SP PTD H+V VPV T KA P
Sbjct: 10682 ASGKPLSKDGSPLPTDNDGHYVLVPVDDSTIKAFP 10716
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Frame = +1
Query: 28 NFSRSFGTPFNKTYRQGPQPFVQ--------QKAYPQTAFARGAS--PQRSQSPKPTDEH 177
NF+ + +P + T PQP+ + Y Q G S Q QSP P H
Sbjct: 175 NFTHAMLSPPHHT-SMTPQPYTEAMEHINGYMSPYDQAQGPSGPSYYSQHHQSPPPHHHH 233
Query: 178 FVKVPVHHETPKAEPPSRAQKSPQQHNLH 264
+P HE P+ + +P+ H
Sbjct: 234 HHPMPKIHENPEQVASPSIEDAPETKPTH 262
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 127 RGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRR 306
R +S R SPK + V+ + + E + SP+Q R + + +R RR
Sbjct: 400 RRSSRDRKSSPKQRQDSPVRRRRSPSSIRKESQRVRKHSPEQKRNGRHDSRSVSPVRRRR 459
Query: 307 AHS-NNLHLNGNKLLRSLKLNNHHPMI 384
+ S +N L K L+ PM+
Sbjct: 460 SPSPDNRQLGSRKQYSPLRRRQSSPMV 486
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 AFARGASPQRSQ-SPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
A A+ A Q S +P+P +E +P H + A P AQ S QQ
Sbjct: 1485 AAAKAAESQHSSHTPQPPEETTPIIPQHAQQFSAAPTMSAQGSLQQ 1530
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 AFARGASPQRSQ-SPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
A A+ A Q S +P+P +E +P H + A P AQ S QQ
Sbjct: 1604 AAAKAAESQHSSHTPQPPEETTPIIPQHAQQFSAAPTMSAQGSLQQ 1649
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 127 RGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRR 306
R +S R SPK + V+ + + E + SP+Q R + + +R RR
Sbjct: 400 RRSSRDRKSSPKQRQDSPVRRRRSPSSIRKESQRVRKHSPEQKRNGRHDSRSVSPVRRRR 459
Query: 307 AHS-NNLHLNGNKLLRSLKLNNHHPMI 384
+ S +N L K L+ PM+
Sbjct: 460 SPSPDNRQLGSRKQYSPLRRRQSSPMV 486
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 AFARGASPQRSQ-SPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
A A+ A Q S +P+P +E +P H + A P AQ S QQ
Sbjct: 1604 AAAKAAESQHSSHTPQPPEETTPIIPQHAQQFSAAPTMSAQGSLQQ 1649
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 169 DEHFVKVPVHHETPK--AEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAH 312
D F K+P HH+T P SR + H+ HR S+ + H R H
Sbjct: 416 DVVFPKMP-HHQTVTNVRVPSSRGSAISRAHSEHRRSIDRSEPRHHHRHH 464
>Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical
protein C09G5.7 protein.
Length = 395
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 145 RSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHS 315
R + +P D ++VP E PK E +K H + + + LR ++++S
Sbjct: 23 RERKSQPQDSALMEVPAKREMPKKE----VKKIRSVHKVESVTKTKSAKLRRKKSYS 75
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 2 GTRISIHRLISHVPLARLLTRLIDKDLNLLY---SKRHTHKXXXXXXXXXXXXXXXNLPT 172
G+ SI L +PLAR + KD+NL+Y +K H+++ N+P
Sbjct: 207 GSHASI--LAYEIPLARATIQGYSKDINLIYIIVTKEHSYRFFRDQLRSGGKATEMNIPP 264
Query: 173 STSLKS 190
L S
Sbjct: 265 GIVLDS 270
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/98 (21%), Positives = 39/98 (39%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHH 201
P +F+ TP Y QQ Y + P ++ SP T + K+
Sbjct: 88 PKSFAFGSSTPRTLAYLDNLPKSEQQ--YDKKLRPLDQGPSQTTSPTSTTSNTTKMGRLS 145
Query: 202 ETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHS 315
TP+ PP+ + +P ++ + +++ R+A S
Sbjct: 146 MTPQRAPPASHRPAPAMASMTTSMYVTSSAPSTRQAKS 183
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/98 (21%), Positives = 39/98 (39%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHH 201
P +F+ TP Y QQ Y + P ++ SP T + K+
Sbjct: 88 PKSFAFGSSTPRTLAYLDNLPKSEQQ--YDKKLRPLDQGPSQTTSPTSTTSNTTKMGRLS 145
Query: 202 ETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHS 315
TP+ PP+ + +P ++ + +++ R+A S
Sbjct: 146 MTPQRAPPASHRPAPAMASMTTSMYVTSSAPSTRQAKS 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,213,270
Number of Sequences: 27780
Number of extensions: 221843
Number of successful extensions: 881
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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