Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0205
(563 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34440.1 68417.m04894 protein kinase family protein contains ... 33 0.100
At5g15890.1 68418.m01859 expressed protein 33 0.17
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 33 0.17
At2g32840.2 68415.m04021 proline-rich family protein Common fam... 31 0.53
At2g32840.1 68415.m04020 proline-rich family protein Common fam... 31 0.53
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 30 0.93
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 30 0.93
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 30 0.93
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 30 1.2
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 1.2
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 1.6
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 29 1.6
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 1.6
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 29 2.1
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 29 2.1
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 29 2.1
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 2.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 2.8
At4g35560.1 68417.m05053 expressed protein 28 5.0
At3g56720.1 68416.m06309 expressed protein 27 6.5
At2g02450.2 68415.m00185 no apical meristem (NAM) family protein... 27 6.5
At2g02450.1 68415.m00184 no apical meristem (NAM) family protein... 27 6.5
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 27 6.5
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 27 6.5
At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family p... 27 8.7
At1g49270.1 68414.m05524 protein kinase family protein contains ... 27 8.7
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 27 8.7
At1g01690.1 68414.m00087 expressed protein 27 8.7
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 33.5 bits (73), Expect = 0.100
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP+ S SF P ++ P + P A +P+ P P V P
Sbjct: 47 PPPDISASFSPPPAPPTQETSPPTSPSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAP 106
Query: 199 HETPKAEPPSR 231
+TP + P R
Sbjct: 107 PQTPSNQSPER 117
>At5g15890.1 68418.m01859 expressed protein
Length = 526
Score = 32.7 bits (71), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Frame = +1
Query: 85 PFVQQKAYPQTAFARGASPQRSQSPKPTDE--------HFVKVPVHHETPKAEPPSR--- 231
P+ + +++F R P++ PTD F ++P +P PP R
Sbjct: 77 PYHTPSKHRKSSFHRIPKPKKGPISSPTDHIPLRQRSSSFDQIPSPMNSPVPAPPHRNSS 136
Query: 232 AQKSPQQHNLHRXSLLNNTSLRHRRAHSNN 321
A +SP N + LN+TSLRH + S++
Sbjct: 137 ADQSPSPVNGPIPAPLNHTSLRHLNSSSDD 166
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 154 SPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLL 279
SP P EH+ P HH + PP R P LH S L
Sbjct: 82 SPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFSSPL 123
>At2g32840.2 68415.m04021 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 291
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 109 PQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEP 222
P F R A PQ QSP+ H VP H P+A P
Sbjct: 152 PMNQFMRAAHPQNQQSPQLGSGHMKGVP-HFLQPRATP 188
>At2g32840.1 68415.m04020 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 337
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 109 PQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEP 222
P F R A PQ QSP+ H VP H P+A P
Sbjct: 152 PMNQFMRAAHPQNQQSPQLGSGHMKGVP-HFLQPRATP 188
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHH 201
PP FS + PF+ + P + Q YP PQ Q P + + P H
Sbjct: 46 PPGFSSFY--PFSSSQANQHTPDLNQAQYP---------PQHQQPQNPPPVYQQQPPQHA 94
Query: 202 ETPKAEPPSRAQKSPQQHN 258
P P R+ +SP N
Sbjct: 95 SEPSLVTPLRSFRSPDVSN 113
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +1
Query: 22 PPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHH 201
PP FS + PF+ + P + Q YP PQ Q P + + P H
Sbjct: 46 PPGFSSFY--PFSSSQANQHTPDLNQAQYP---------PQHQQPQNPPPVYQQQPPQHA 94
Query: 202 ETPKAEPPSRAQKSPQQHN 258
P P R+ +SP N
Sbjct: 95 SEPSLVTPLRSFRSPDVSN 113
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 30.3 bits (65), Expect = 0.93
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQ--SPKPTDEHFVKVP 192
PPP S+S N+T Q P P K+ Q +SP SPK ++ H K P
Sbjct: 227 PPPLPSKSIDE--NETRSQSP-PISPPKSDKQARSQTHSSPSPPPLLSPKASENHQSKSP 283
Query: 193 VHHETPKAEPPSRAQKSP 246
+ +P A+ + KSP
Sbjct: 284 MPPPSPTAQISLSSLKSP 301
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQ--TAFARGASPQRSQSPKPTDEHFVKVP 192
P P+ + P + P P ++ P T F +P++S SP PT P
Sbjct: 80 PIPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAP 139
Query: 193 VHHETPKAEPPSRAQKSPQQHNLHRXSLLNN 285
+ + PP +KSP H S +N
Sbjct: 140 KKSPSTPSLPPPTPKKSPPPPPSHHSSSPSN 170
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 85 PFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
P ++ PQ P+ S P+P + + P E+PK +PP + P++
Sbjct: 528 PKPEESPKPQPPKQETPKPEESPKPQPPKQ---ETPKPEESPKPQPPKQETPKPEE 580
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 94 QQKAYPQTAFARGASPQRSQS----PKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
Q+ P+ + SP++ S PKP + + P E+PK +PP + P++
Sbjct: 492 QEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEE 548
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYR--QGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVP 192
P P S P +T + + P+P ++ P+ + P + ++PKP + + P
Sbjct: 528 PKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPP 587
Query: 193 VHHETPKAEPP 225
+ PK E P
Sbjct: 588 KQEQPPKTEAP 598
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 73 QGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQKSPQQ 252
+ P+P ++ P+ + P + ++PKP +E P ETPK E + Q Q+
Sbjct: 532 ESPKPQPPKQETPKPEESPKPQPPKQETPKP-EESPKPQPPKQETPKPEESPKPQPPKQE 590
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 70 RQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPSRAQ 237
++ P+P ++ PQ P+ S P+P + + P E+PK +PP + Q
Sbjct: 541 QETPKP--EESPKPQPPKQETPKPEESPKPQPPKQ---ETPKPEESPKPQPPKQEQ 591
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
P P S P K +P ++ P++ + SP+ Q PKP E +
Sbjct: 435 PKPEESPKPQQPSPKPETPSHEPSNPKEPKPESP--KQESPKTEQ-PKPKPESPKQESPK 491
Query: 199 HETPKAEPPSRAQKSPQQHN 258
E PK E P +SP+Q +
Sbjct: 492 QEAPKPEQPKPKPESPKQES 511
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 HENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQ-RSQSPKPTDEHF 180
HE +P S KT + P+P ++ P+ + P+ + +SPK
Sbjct: 455 HEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSK- 513
Query: 181 VKVPVHHETPKAEPPSRAQKSPQ 249
+ P E+PK EPP + ++SP+
Sbjct: 514 QEPPKPEESPKPEPP-KPEESPK 535
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Frame = +1
Query: 1 RHENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASP--QRSQSPKPTDE 174
R + PP RS P + P + P R SP +R +SP P
Sbjct: 309 RRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPPPARR 368
Query: 175 HFVKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHS 315
P PP+R ++SP L+R + + R R+ S
Sbjct: 369 RRSPSPPARRRRSPSPPARRRRSPSP--LYRRNRSPSPLYRRNRSRS 413
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/71 (26%), Positives = 26/71 (36%)
Frame = +1
Query: 34 SRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPK 213
SRS + R+ PF + P R R QSP P+ P
Sbjct: 263 SRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRS 322
Query: 214 AEPPSRAQKSP 246
PP+R ++SP
Sbjct: 323 PSPPARRRRSP 333
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 PQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKV-PVHHETPKAEPPSRAQKSPQQ 252
P+ + + P+ + + + ++PK ++ K P HE+PK E P + P+Q
Sbjct: 399 PRTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQ 457
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 326 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 383
Query: 178 FVKVPVHHETPKAEPPSR--AQKSPQQHNLHRXS 273
+ PV+H P PP KSP +H S
Sbjct: 384 YSPPPVYHSPP---PPKEKYVYKSPPPPPVHHYS 414
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYR-QGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDE 174
+++ PPP + P K Y + P P V+ + P + P++ +SP P +
Sbjct: 46 KHYSPPPVYHSP--PPPKKHYEYKSPPPPVKHYS-PPPVYHSPPPPKKHYVYKSPPPPVK 102
Query: 175 HFVKVPVHHETPKAEPPSR--AQKSP 246
H+ PV+H P PP + KSP
Sbjct: 103 HYSPPPVYHSPP---PPKKHYVYKSP 125
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 74 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 131
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 132 YSPPPVYHSPP---PPKKHYVYKSP 153
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 102 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 159
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 160 YSPPPVYHSPP---PPKKHYVYKSP 181
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 130 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 187
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 188 YSPPPVYHSPP---PPKKHYVYKSP 209
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 158 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 215
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 216 YSPPPVYHSPP---PPKKHYVYKSP 237
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 186 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 243
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 244 YSPPPVYHSPP---PPKKHYVYKSP 265
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 214 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 271
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 272 YSPPPVYHSPP---PPKKHYVYKSP 293
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 242 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 299
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 300 YSPPPVYHSPP---PPKKHYVYKSP 321
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 270 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 327
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 328 YSPPPVYHSPP---PPKKHYVYKSP 349
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 7 ENFHPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRS---QSPKPTDEH 177
+++ PPP + + Y+ P P P + P++ +SP P +H
Sbjct: 298 KHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYS--PPPVYHSPPPPKKHYVYKSPPPPVKH 355
Query: 178 FVKVPVHHETPKAEPPSR--AQKSP 246
+ PV+H P PP + KSP
Sbjct: 356 YSPPPVYHSPP---PPKKHYVYKSP 377
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP + S P Y P P+V P ++ P S P P E PV
Sbjct: 485 PPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPS-PPPPCPESSPPPPVV 543
Query: 199 HETPKAEPP 225
+ P + P
Sbjct: 544 YYAPVTQSP 552
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +1
Query: 94 QQKAYPQTAFARGASPQRSQSPKPTDEHF-----VKVPVHHETPKAEPPSRAQKSPQQHN 258
+++ P + + G+S Q P D HF + + H+ P + + +N
Sbjct: 144 RKRPCPSSIYEMGSSSQYHGDRTPADTHFPSELHLGKSITHDHDPHYMPWLMNPTYRSNN 203
Query: 259 LHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNNH 372
L ++ ++R R + L N L RSL L++H
Sbjct: 204 LSIRGESSSRNVRSRPTLDSETSLGRNNLPRSLSLDSH 241
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Frame = +1
Query: 94 QQKAYPQTAFARGASPQRSQSPKPTDEHF-----VKVPVHHETPKAEPPSRAQKSPQQHN 258
+++ P + + G+S Q P D HF + + H+ P + + +N
Sbjct: 144 RKRPCPSSIYEMGSSSQYHGDRTPADTHFPSELHLGKSITHDHDPHYMPWLMNPTYRSNN 203
Query: 259 LHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNNH 372
L ++ ++R R + L N L RSL L++H
Sbjct: 204 LSIRGESSSRNVRSRPTLDSETSLGRNNLPRSLSLDSH 241
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP +S S P TY+ P P+V P ++ + P P P +
Sbjct: 719 PPPYYSPS---P-KPTYKSPPPPYVYSSPPPPPYYSPSPKVEYKSPPPPYVYSSPPPPYY 774
Query: 199 HETPKAE----PPSRAQKSP 246
+PK E PP SP
Sbjct: 775 SPSPKVEYKSPPPPYVYSSP 794
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP +S S P Y+ P P+V P ++ P SP P P +
Sbjct: 543 PPPCYSHS---P-KIEYKSPPTPYVYHSPPPPPYYSPSPKPAYKSSPPPYVYSSPPPPYY 598
Query: 199 HETP----KAEPPSRAQKSP 246
P K+ PP SP
Sbjct: 599 SPAPKPVYKSPPPPYVYNSP 618
Score = 27.1 bits (57), Expect = 8.7
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP +S S P Y+ P P+V P ++ P P P F P +
Sbjct: 267 PPPYYSPS---P-KPIYKSPPPPYVYNSP-PPPYYSPSPKPAYKSPPPPYVYSFPPPPYY 321
Query: 199 HETP----KAEPPSRAQKSP 246
+P K+ PP SP
Sbjct: 322 SPSPKPVYKSPPPPYVYNSP 341
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
PPP + TP T P P P T + G S +S P P ++P H
Sbjct: 709 PPPPAPPAPPTPIVHTSSPPPPPPPPPPPAPPTPQSNGISAMKSSPPAPPAP--PRLPTH 766
Query: 199 HETPKAEPPSRAQKSP 246
+P PP A P
Sbjct: 767 SASP---PPPTAPPPP 779
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVP-- 192
PPP S P Y P P V + P P SP P + H+ P
Sbjct: 632 PPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPP------PVHYSSPPPPEVHYHSPPPS 685
Query: 193 -VHHETPKAEPPSRAQKSP 246
VH+ +P P + ++SP
Sbjct: 686 PVHYSSPPPPPSAPCEESP 704
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 542 LPSVSILTKLDGSLVSISSRNKYLLSFLVPSK-ILNISHKVKNVGLNTENLCY-GII 378
LP ++I DG LV ++ ++ ++S ++P K + + V ++C+ GII
Sbjct: 650 LPEITISASWDGDLVMVNGDDELIVSSVLPQKETFRLVESMNRVYKKDNSVCHEGII 706
>At3g56720.1 68416.m06309 expressed protein
Length = 386
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARG-ASPQRSQSPKPTDEHFVKVPV 195
PP + T F K G +++A + SP+R+QSP P PV
Sbjct: 8 PPHDDGGDTTTAFRKPSNDGTSRKYRRRALADDGSSSSDGSPERNQSPNPKHSRKDSEPV 67
Query: 196 H 198
H
Sbjct: 68 H 68
>At2g02450.2 68415.m00185 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 414
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 223 PSRAQKSPQQHNLHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNN 369
PS + +H+ H S + +LR ++ HS++ + + N L + +NN
Sbjct: 205 PSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINN 253
>At2g02450.1 68415.m00184 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 379
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 223 PSRAQKSPQQHNLHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNN 369
PS + +H+ H S + +LR ++ HS++ + + N L + +NN
Sbjct: 205 PSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINN 253
>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 100 KAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPKAEPPS 228
K Y ++ A A + +P P E VK P PKA PS
Sbjct: 197 KDYTPSSTADAAPTKAEPTPAPPKEEKVKQPSSPPEPKASKPS 239
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
finger (ZZ type) family protein contains Pfam profiles
PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +1
Query: 181 VKVPVHHETPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHSNNLHLN 333
V + H+ +PP+R Q+ P Q + LN L+ + + L N
Sbjct: 400 VNSSLSHQQQFQQPPNRFQQQPNQIQQQQQQFLNQRKLKQQTPQQHRLISN 450
>At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family
protein similar to fasciclin-like
arabinogalactan-protein 1 [Arabidopsis thaliana]
gi|13377776|gb|AAK20857
Length = 280
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 19 PPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVH 198
P P+ + TP +G P+TA A ++P S SP P + K +
Sbjct: 190 PAPSPKKGAATPAPAPADEGDYADAPPGLAPETAPA--SAPSESDSPAPAPDKSGKKKM- 246
Query: 199 HETPKAEPPSRAQKS 243
+AEPPS A +
Sbjct: 247 AAADEAEPPSSASNT 261
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 73 QGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHETPK-AEPPSRAQKSP 246
Q P+ P ++ Q++ SP P+D P +P A PP + Q+SP
Sbjct: 5 QSPENSPPAPPPPSPPSPPSSNDQQTTSPPPSDNQETTSPPPPSSPDIAPPPQQQQESP 63
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 25 PNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPVHHE 204
PN S +P RQGP P Q +A Q R PQ P+ ++P +E
Sbjct: 436 PNQQPSGPSPNRHPDRQGPPPRFQNQAPNQQPTGR-FEPQPPNPPRAPPRPQTRLP--NE 492
Query: 205 TPKAEPPSRAQKS 243
T +P + + S
Sbjct: 493 TSNEQPTAPGRSS 505
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 205 TPKAEPPSRAQKSPQQHNLHRXSLLNNTSLRHRRAHSNNLHLNGNKLLRSLK 360
T + R ++SPQ+ + NN+S R + NLHL ++++R LK
Sbjct: 381 TARRTKRKRKKRSPQEEEVDNE---NNSSEDSRLMGAKNLHLFLSEIMRKLK 429
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,475,977
Number of Sequences: 28952
Number of extensions: 197317
Number of successful extensions: 778
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -