Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0204
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 0.63
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 0.65
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.86
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.86
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.86
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 1.5
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 29 3.5
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 29 3.5
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 3.5
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 3.5
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 29 3.5
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 3.5
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 3.5
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 6.0
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 28 6.0
Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical pr... 27 8.0
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58748-1|ABN43078.1| 173|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical ... 27 8.0
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 27 8.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 8.0
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect(2) = 0.63
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 112 SRLGASTPPPPP 77
SR G S+PPPPP
Sbjct: 131 SRAGGSSPPPPP 142
Score = 23.8 bits (49), Expect(2) = 0.63
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 103 GASTPPPPPFAQSRCSTSPYRGP 35
G+S PPPPP R T P R P
Sbjct: 135 GSSPPPPPPPRVPR--TPPPRSP 155
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 152 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 33
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 170 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 33
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -3
Query: 232 PQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCST 53
P L P SC + S R + SK + R PR R S PPPPP S
Sbjct: 218 PGLGP-ASCQKVRPRQSNTRDSVWDGSKKLGSRHPRSLKSQRFEPSQPPPPPPPPPEVSI 276
Query: 52 SP 47
+P
Sbjct: 277 AP 278
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSK-GVALRTPR*ASPSRLGASTPPPPPFAQSRC 59
P ++CSRN PR RC K G R+P + R+ PPP P + C
Sbjct: 1879 PRLNTCSRNAICYDEPR-GYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPC 1933
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSK-GVALRTPR*ASPSRLGASTPPPPPFAQSRC 59
P ++CSRN PR RC K G R+P + R+ PPP P + C
Sbjct: 2463 PRLNTCSRNAICYDEPR-GYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPC 2517
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSK-GVALRTPR*ASPSRLGASTPPPPPFAQSRC 59
P ++CSRN PR RC K G R+P + R+ PPP P + C
Sbjct: 1879 PRLNTCSRNAICYDEPR-GYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPC 1933
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSK-GVALRTPR*ASPSRLGASTPPPPPFAQSRC 59
P ++CSRN PR RC K G R+P + R+ PPP P + C
Sbjct: 2463 PRLNTCSRNAICYDEPR-GYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPC 2517
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSK-GVALRTPR*ASPSRLGASTPPPPPFAQSRC 59
P ++CSRN PR RC K G R+P + R+ PPP P + C
Sbjct: 2463 PRLNTCSRNAICYDEPR-GYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPC 2517
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 205 SRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
S G+STS A SS T + +PS G+STP P P
Sbjct: 1237 STEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNP 1279
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 110 PTRRVNTPAPAVRPITMFDQPIPW 39
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 170 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 33
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -3
Query: 235 RPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
RP PP + S T P Q S++G A R P P G TPPPPP
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP---QDLSTEGNASRRP---PPPPKGTGTPPPPP 203
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = -3
Query: 235 RPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCS 56
RP PP + S T P Q S +G A R P P G +PPPPP + +
Sbjct: 219 RPPPPPKGTGSPTPPPTGEP---QDLSGEGNASRRP---PPPPKGTGSPPPPPTGEPQDL 272
Query: 55 TSPYRGPRR 29
+ RR
Sbjct: 273 SGEGNASRR 281
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -3
Query: 235 RPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCS 56
RP PP + S T P Q S +G A R P P G +PPPPP + +
Sbjct: 126 RPPPPPKGTGSPPPPPTGEP---QDLSGEGNASRRP---PPPPKGTGSPPPPPTGEPQDL 179
Query: 55 TSPYRGPRR 29
++ RR
Sbjct: 180 STEGNASRR 188
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 13 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 70
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 199 NGASTSTPRKAQRCSSKGVALRTPR*ASPSRLG---ASTPPPPPFAQSRCSTSPYRGP 35
NG S TP + S + V +TPR ++P+ A PPP P R + +GP
Sbjct: 136 NGMSPRTPPRGIHHSGEPVHQKTPRKSAPNMSVDSIAMPPPPVPPRPLRLPQTAAKGP 193
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 134 NTTLSIPLPTRRVNTPAPAVRPITMFDQP----IPWAPK 30
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 300 SSPMTPPSTTRVGRRLASSTTSDRSYHHGTVVPE 199
+SP+ ST R SS ++ + HHG VP+
Sbjct: 337 TSPLLASSTERTATTATSSVSTPKHPHHGCHVPQ 370
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 116 PLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLG 15
PLP +N +P VRP+ F + P K LG
Sbjct: 42 PLPPPTINIESPPVRPLKAFISSAYYYPTSKSLG 75
>Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical
protein ZC518.1a protein.
Length = 499
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 63 RDWANGGGGGVDAPSREGDAQRGVRRATPFEEH 161
R ANG GVD +R GD + V + P + H
Sbjct: 449 RTSANGSQNGVDLWTRAGDIEMNVATSNPNQVH 481
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical
protein M02E1.1a protein.
Length = 1077
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 125 LSIPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLG 15
++ PLP+ P+ VRP T FD IP+ ++G
Sbjct: 890 MATPLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIG 925
>U58748-1|ABN43078.1| 173|Caenorhabditis elegans Hypothetical
protein ZK180.7 protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 99 APSREGDAQRGVRRATPFEEHRCAFRGVDVDAPFREQLSH 218
A +R G ++ R E H C +RG+D P QL H
Sbjct: 54 AVNRSGTIRQYYDRFCVHESH-CLYRGIDESCPTLNQLDH 92
>AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical
protein Y43F8A.2 protein.
Length = 502
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = -3
Query: 208 CSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSR 62
CS +T TP A + TP + PPPPP AQ +
Sbjct: 16 CSAEN-TTDTPSTADPTAGSTDTSATPMPTDAPTAAPANPPPPPAAQQK 63
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 145 PLLKSTAVLFVGLMSMRHFGNNCP 216
PL+ +A+ + G +S+ H+G++CP
Sbjct: 154 PLVSGSALRWDGQLSVYHYGSDCP 177
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.0 bits (52), Expect(2) = 8.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 205 SRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
+R G +T Q + T R +SPS PPPPP
Sbjct: 1306 NRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPPPPPP 1348
Score = 20.6 bits (41), Expect(2) = 8.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 91 PPPPPFAQSRCST 53
PPPPP S+ T
Sbjct: 1358 PPPPPPTMSKAPT 1370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,847,261
Number of Sequences: 27780
Number of extensions: 337808
Number of successful extensions: 1624
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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