Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0204
(612 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g70895.1 68414.m08180 CLE17, putative CLAVATA3/ESR-Related 17... 35 0.037
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 33 0.15
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 33 0.15
At2g37100.1 68415.m04552 protamine P1 family protein contains Pf... 31 0.46
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 31 0.60
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 31 0.60
At1g08170.1 68414.m00902 histone H2B family protein similar to h... 30 1.1
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 1.4
At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase... 30 1.4
At4g17940.1 68417.m02672 expressed protein 29 1.8
At3g24540.1 68416.m03082 protein kinase family protein contains ... 29 1.8
At2g33690.1 68415.m04129 late embryogenesis abundant protein, pu... 29 1.8
At5g55020.1 68418.m06853 myb family transcription factor (MYB120... 29 2.4
At5g07820.1 68418.m00896 expressed protein 28 4.2
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 28 4.2
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 4.2
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 28 4.2
At1g62870.1 68414.m07099 expressed protein 28 4.2
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 25 4.6
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 28 5.6
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 28 5.6
At2g23120.1 68415.m02758 expressed protein 28 5.6
At2g11090.1 68415.m01187 expressed protein 28 5.6
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 27 7.4
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 27 7.4
At1g42740.1 68414.m04939 hypothetical protein 27 7.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 7.4
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 23 8.3
At5g32161.1 68418.m03792 hypothetical protein 27 9.8
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 27 9.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 9.8
At2g34670.1 68415.m04259 proline-rich family protein contains pr... 27 9.8
At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 9.8
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 27 9.8
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 9.8
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 24 9.9
>At1g70895.1 68414.m08180 CLE17, putative CLAVATA3/ESR-Related 17
(CLE17)
Length = 99
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 106 LGASTPPPPPFAQSRCSTSPYRGP 35
L AS PPPPP R ST+P+RGP
Sbjct: 53 LVASPPPPPPRKALRYSTAPFRGP 76
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -3
Query: 211 SCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPP 80
S SR+ +S+S+P ++ S+ R A P+R G S PPPP
Sbjct: 39 SRSRSLSSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPP 82
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 211 SCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
S S + + PRK R S LR R +S S +S PPPPP
Sbjct: 359 SYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPP 403
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -3
Query: 211 SCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPP 80
S SR+ +S+S+P ++ S+ R A P+R G S PPPP
Sbjct: 39 SRSRSLSSSSSPSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPP 82
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 211 SCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
S S + + PRK R S LR R +S S +S PPPPP
Sbjct: 366 SYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPP 410
>At2g37100.1 68415.m04552 protamine P1 family protein contains Pfam
PF00260: Protamine P1
Length = 297
Score = 31.5 bits (68), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 121 ASPSRLGASTPPPPPFAQSRCSTSPYRGPRRSN 23
AS + +TPP F +RC ++PYR P +N
Sbjct: 173 ASSCKSFTATPPRNAFLLTRCRSAPYRSPSSAN 205
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 31.1 bits (67), Expect = 0.60
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -3
Query: 286 TAIYYSGRKKACFIDDFRPQLPPWDSCSRNGASTSTPR-KAQRCSSKGVALRTPR*ASPS 110
TA SG+ + ++ P+ P + S AS P A + S R P A P
Sbjct: 336 TASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPP 395
Query: 109 RLGASTPPPPP 77
G PPPPP
Sbjct: 396 GSGGPKPPPPP 406
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 31.1 bits (67), Expect = 0.60
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -3
Query: 286 TAIYYSGRKKACFIDDFRPQLPPWDSCSRNGASTSTPR-KAQRCSSKGVALRTPR*ASPS 110
TA SG+ + ++ P+ P + S AS P A + S R P A P
Sbjct: 336 TASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPP 395
Query: 109 RLGASTPPPPP 77
G PPPPP
Sbjct: 396 GSGGPKPPPPP 406
>At1g08170.1 68414.m00902 histone H2B family protein similar to
histone H2B from Chlamydomonas reinhardtii [SP|P54347,
SP|P54346, SP|P50565], Volvox carteri [SP|P16867,
SP|P16868]; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 243
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 131 TTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAPK 30
TT+ IP+ R ++P P P+ + D+P P P+
Sbjct: 79 TTVKIPVDDRDESSPQPPETPVEVRDEPSPQPPE 112
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 203 PKWRIDINPTKST--AVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWAPK 30
PK ++P S ++ K G P + T S P P + + +P+ P+T P P APK
Sbjct: 187 PKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMT--SPPAPMAPK 244
>At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 613
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 78 GGGGGVDAPSREGDAQRGVRRATPFEEHRCAF 173
GGGGG D S +GD GV A E C+F
Sbjct: 51 GGGGGTDGDSSDGDGSTGVMGA----EQLCSF 78
>At4g17940.1 68417.m02672 expressed protein
Length = 274
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 69 WANGGGGGVDAPSREGDAQRGVRRATP 149
+ NGGGGG + S+ GD R + R+ P
Sbjct: 136 YGNGGGGGYEDKSKIGDYYREMLRSNP 162
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 136 RTPR*ASPSRLGASTPPPPPFAQSRCSTSPYRGP 35
R+P ++P RLG PPPP + T+P P
Sbjct: 76 RSPSTSTPPRLGNRNPPPPASPSGQEPTTPTMTP 109
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 97 STPPPPPFAQSRCSTSPYRGPRRSNI*ASPR 5
S PPPPP A S SP PR + PR
Sbjct: 55 SEPPPPPKAPVNVSLSPPPPPRSPSTSTPPR 85
>At2g33690.1 68415.m04129 late embryogenesis abundant protein,
putative / LEA protein, putative similar to responsive
to water deficit, novel late embryogenesis abundant-like
protein PvLEA-18 (GI:2347086) [Phaseolus vulgaris]
Length = 71
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 21 IFDLRGPRYGLVEHRDWANGGGGGV-DAPSREGDA 122
I D + YG H+D G GGG DAP+ GDA
Sbjct: 23 IEDYKKNAYGTSGHQDVKPGHGGGTTDAPTPSGDA 57
>At5g55020.1 68418.m06853 myb family transcription factor (MYB120)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 523
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3
Query: 118 SPSRLGASTPPPPPFAQSRCS 56
+PS+L +STPPPPP + CS
Sbjct: 226 TPSQL-SSTPPPPPLSSPLCS 245
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 193 ASTSTPRKAQRCSSKGVALRTPR*A-SPSRLGAS-TPPPPPFAQ 68
+ TS P K Q S+ V P P R+G TPPPPP Q
Sbjct: 379 SKTSLPEKKQSGSANLVTNPKPESKIRPKRIGLKVTPPPPPTKQ 422
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 202 RNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCSTSP 47
R+ + + TP + +R S G +PR SP +P PPP S SP
Sbjct: 124 RSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 175
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 140 PPNTTLSIPLPTRRVNTPAPAVRP-ITMFDQPIPWAP 33
PP T S+P PT V+ P P P + P+P P
Sbjct: 137 PPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDP 173
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 115 PSRLGASTPPPPPFAQSRCSTSPYRGPRRSNI*ASP 8
P+ + S PPPPP + S SP + P S+ A P
Sbjct: 188 PTTIVLSLPPPPPQSLSLSLPSPPQPPPSSSFHAEP 223
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 321 LRRPIWRSSPMTPPSTTRVGRRLASSTTSDRSYHHGTVVPEMAHRHQPHEKHSGA 157
L +PI SP PP + R+ SS ++HH H PH H G+
Sbjct: 112 LPKPISTISPSPPPPPSSSHRKRNSSAVEALNHHH----------HHPHHHHQGS 156
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 25.4 bits (53), Expect(2) = 4.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -3
Query: 178 PRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
PR R + G + P P G PPPPP
Sbjct: 652 PRPPPRSAGGGKSTNLPSARPPLPGGGPPPPPPP 685
Score = 21.0 bits (42), Expect(2) = 4.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 103 GASTPPPPPFAQSR 62
G PPPPP A R
Sbjct: 697 GPPPPPPPPGALGR 710
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = -3
Query: 271 SGRKKACFIDDFRP----QLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRL 104
S R + F DF+ Q PP + R G + K P+ PSR+
Sbjct: 285 SSRPEPDFKPDFKQRQWNQNPPMVANPRKGTEQISIAKKLDSVKPPQPTLPPQLVEPSRV 344
Query: 103 GASTPPPPP 77
+ +PPPPP
Sbjct: 345 QSPSPPPPP 353
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 280 IYYSGRKKACFIDDFRPQLPPWDSCSRNGASTSTPRKAQ 164
+ YS K+ IDD PQ+P + +N S PRK+Q
Sbjct: 376 VRYSSSKENDHIDDDLPQIP--EETRKNSNLDSKPRKSQ 412
>At2g23120.1 68415.m02758 expressed protein
Length = 83
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 27 DLRGPRYGLVEHRDWANG-GGGGVDAPSREGDA 122
D + YG H++ G GGG DAP+ GDA
Sbjct: 40 DYKLKAYGAEGHQEPTPGLGGGSTDAPTPSGDA 72
>At2g11090.1 68415.m01187 expressed protein
Length = 151
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -1
Query: 354 PREAISASAPGLRRPIWRSSPM-TPPSTTRVGRRLASSTTSDRSYHHGTVVPEMAHRH 184
P I + R P SSP T P T GR+ SS + D S H VP + R+
Sbjct: 90 PSTTIPITRLHTRLPASESSPFCTQPDTRAEGRKEDSSLSLDHSLDHLGRVPFLIRRN 147
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 97 STPPPPPFAQSRCSTSPYRGPRRSNI*ASP 8
+ PPPPP Q+R ++P P + SP
Sbjct: 774 TAPPPPPLGQTRAPSAPPPPPPKLGTKLSP 803
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 261 RRLASSTTSDRSYHHGTV-VPEMAHRHQPHEKHS 163
RR+ + DR H T + + AHRHQ H+ S
Sbjct: 144 RRILTPVRCDRCGHASTAEMKDQAHRHQHHQHSS 177
>At1g42740.1 68414.m04939 hypothetical protein
Length = 359
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 241 DFRPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
D PQ +S ++PR+ + S+ + L P P RL S+PPP P
Sbjct: 222 DRHPQQTALESFITAVIDAASPRQTAKSSTAPLLLNPP----PKRLRYSSPPPTP 272
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 178 PRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
P KA ++ P S +RLGA PPPPP
Sbjct: 687 PPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPP 720
Score = 25.0 bits (52), Expect(2) = 7.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 91 PPPPPFAQSRCSTSPYRGP 35
PPPPP S S SP + P
Sbjct: 508 PPPPPLFMSTTSFSPSQPP 526
Score = 20.6 bits (41), Expect(2) = 7.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3
Query: 130 PR*ASPSRLGASTPPPPP 77
P S + S PPPPP
Sbjct: 491 PLFTSTTSFSPSQPPPPP 508
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 23.4 bits (48), Expect(2) = 8.3
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Frame = -3
Query: 277 YYSGRKKACF----IDDFRPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPS 110
++SG AC DD R LP S C+S G + +P P
Sbjct: 326 FFSGEPPACLRLQEFDDRRNCLPSRPMQRSLAECKSFSSYPIDCASFGCSPPSPPPPPPP 385
Query: 109 RLGASTPPPPP 77
PPPPP
Sbjct: 386 PPPPPPPPPPP 396
Score = 22.2 bits (45), Expect(2) = 8.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 91 PPPPPFAQSRCSTSPYRGP 35
PPPPP+ + PY P
Sbjct: 427 PPPPPYVYPPPPSPPYVYP 445
>At5g32161.1 68418.m03792 hypothetical protein
Length = 193
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -2
Query: 185 INPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMFDQPIPWA 36
I P ST +TTL PL R TP RP T+ PW+
Sbjct: 62 ILPVHSTTRSSNLSSGHSTTLLDPLVEYRFATPPDHTRPFTLPRYSTPWS 111
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 27.1 bits (57), Expect = 9.8
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Frame = -3
Query: 235 RPQLPPWDSCSRNGASTSTPRKAQRCSS----KGVALRTPR*ASPSRLGASTPPPPP--- 77
RP P +C R A PR C + V + +P PS G + PPPPP
Sbjct: 601 RPPSRPRYACCRIPAVNPPPRLV--CGPYPLPRLVRVGSPSPPPPSMSGGAPPPPPPPPM 658
Query: 76 FAQSRCSTSPYRGPRRS 26
SR + P+ RS
Sbjct: 659 LVASRTAPPPHLSHVRS 675
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -3
Query: 223 PPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 77
PP +S N ++P K +R + + SP +PPPPP
Sbjct: 603 PPLESPVPNDPYDASPIKKRRPQPPSPSTEETKTTSPQSPPVHSPPPPP 651
>At2g34670.1 68415.m04259 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 561
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 157 SSKGVALRTPR*ASPSRLGASTPPPPPFA 71
+S G++L P + P L S PPPPPF+
Sbjct: 66 TSYGLSLPLPP-SPPPTLPPSPPPPPPFS 93
>At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 174
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 200 KWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPA 78
K + ++P KST PP+TT S +R + P+P+
Sbjct: 100 KIHVFLSPLKSTRTTANSSPPPSTTSSSSSKSRSRSPPSPS 140
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 9.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 211 SCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCST-SPYRGP 35
S S + S S + SS + +P P L S+PPPPP + S S+ SP P
Sbjct: 28 SPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSP 87
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 151 KGVALRTPR*ASPSRLGASTPPPPPFAQSRCSTSP--YRGPRRS 26
KG A P P + GA PPPPP ++ P +GP +S
Sbjct: 403 KGPAAPPPP-PPPGKKGAGPPPPPPMSKKGPPKPPGNPKGPTKS 445
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = -3
Query: 235 RPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCS 56
RP PP DS + P++ ++ G TP SPS P PP
Sbjct: 206 RPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPSPPEETL 265
Query: 55 TSPYRGP 35
P P
Sbjct: 266 PPPKPSP 272
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 91 PPPPPFAQSRCSTSP 47
PPPPP + R + SP
Sbjct: 575 PPPPPISSLRSTPSP 589
Score = 21.4 bits (43), Expect(2) = 9.9
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 7/61 (11%)
Frame = -3
Query: 238 FRPQLPPWDSCSRNGASTSTPRKAQRCSSKGVALRTPR*AS-------PSRLGASTPPPP 80
F P L P S AS P+ S G S P R+ + PPPP
Sbjct: 516 FLPTLHPLTSSQPKKASPQCPQSPTPVHSNGPPSAEAAVTSSPLPPLKPLRILSRPPPPP 575
Query: 79 P 77
P
Sbjct: 576 P 576
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,531
Number of Sequences: 28952
Number of extensions: 322001
Number of successful extensions: 1728
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1678
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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