Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0190
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase f...    28   3.3  
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati...    28   3.3  
At4g02550.2 68417.m00349 expressed protein                             28   4.4  
At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton sy...    28   4.4  
At5g35930.1 68418.m04322 AMP-dependent synthetase and ligase fam...    27   5.8  
At2g02860.1 68415.m00236 sucrose transporter / sucrose-proton sy...    27   7.7  
At1g31300.1 68414.m03830 expressed protein similar to hypothetic...    27   7.7  

>At5g16010.1 68418.m01872 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein similar to steroid 5alpha-reductase - Rattus
           norvegicus, PIR:A34239 [SP|24008]; contains Pfam
           3-oxo-5-alpha-steroid 4-dehydrogenase domain PF02544
          Length = 268

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +1

Query: 16  LTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLIPYL 195
           +++ GV  L N  W+ I    +   L + +  V S +       FGS++   G+LL+   
Sbjct: 20  MSVVGVAALANIGWSEI----RGNHLKYSKFGVSSSSPQPQKERFGSISSRNGMLLLYTP 75

Query: 196 AWLGYASS 219
           A+L  ASS
Sbjct: 76  AFLAAASS 83


>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
           similar to inorganic phosphate transporter (GI:3869190)
           [Arabidopsis thaliana]
          Length = 280

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +1

Query: 64  IFFGLKDFKLAF-----IEISVLSGAAVATTLSFGSVNKTAGLLLIPYLAWLGYASSLSY 228
           IFFG    KL       + + +++  ++A++LSFG   KT  + L  +  WLG+     Y
Sbjct: 68  IFFGCLGDKLGRKRVYGLTLLIMTICSIASSLSFGKDPKTVMVTLCFFRFWLGFGIGGDY 127


>At4g02550.2 68417.m00349 expressed protein
          Length = 278

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 107 ISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGSS 6
           I++N   K+F  K+I + ++L + C  Y   GSS
Sbjct: 117 IAVNPDAKAFRGKQIEMYEELRTVCGDYQTPGSS 150


>At1g71890.1 68414.m08311 sucrose transporter / sucrose-proton
           symporter (SUC5) nearly identical to sucrose transporter
           [Arabidopsis thaliana] GI:12057172
          Length = 512

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 112 VLSGAAVATTLSFGSVNKTAGLLLIPYLAWLGYASSLSYYIWKNNP 249
           ++S A++A  + FG   + +  LL PY+  LG     S Y+W   P
Sbjct: 34  IISVASIAAGVQFGWALQLS--LLTPYIQLLGIPHKWSSYMWLCGP 77


>At5g35930.1 68418.m04322 AMP-dependent synthetase and ligase family
           protein similar to iturin A synthetase C [Bacillus
           subtilis] GI:16040972; contains Pfam profile PF00501:
           AMP-binding enzyme
          Length = 1040

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 291 KYSIVRIFIVPSRFRIVLPDVVRKG 217
           +YSI R+  VPS  R +LP +  +G
Sbjct: 192 EYSISRLLAVPSMIRAILPTLQHRG 216


>At2g02860.1 68415.m00236 sucrose transporter / sucrose-proton
           symporter (SUC3) identical to sucrose transporter
           [Arabidopsis thaliana] GI:8052190; similar to sucrose
           transporters from [Oryza sativa (japonica
           cultivar-group)] GI:2723471, [Zea mays] GI:5771354,
           [Triticum aestivum] GI:19548165; contains Pfam profile
           PF00083: major facilitator superfamily protein
          Length = 594

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 106 ISVLSGAAVATTLSFGSVNKTAGLLLIPYLAWLGYASSLSYYIWKNNP 249
           ++++    VA  + FG   + +  LL PY+  LG + + S +IW   P
Sbjct: 61  VTLVLSCTVAAGVQFGWALQLS--LLTPYIQTLGISHAFSSFIWLCGP 106


>At1g31300.1 68414.m03830 expressed protein similar to hypothetical
           protein GB:AAF24587 GI:6692122 from [Arabidopsis
           thaliana]
          Length = 278

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 482 IYMFLHIFIYFNNVM 438
           IYMF H+++++N VM
Sbjct: 222 IYMFYHVYLHYNQVM 236


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,649,341
Number of Sequences: 28952
Number of extensions: 204502
Number of successful extensions: 521
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)