Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0188
(522 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1BIV9 Cluster: Outer membrane autotransporter barrel d... 41 0.015
UniRef50_UPI00005F8D66 Cluster: COG3468: Type V secretory pathwa... 41 0.020
UniRef50_Q137J7 Cluster: Outer membrane autotransporter barrel p... 40 0.046
UniRef50_Q11KT9 Cluster: Outer membrane autotransporter barrel d... 40 0.046
UniRef50_Q3K9R0 Cluster: Outer membrane autotransporter barrel; ... 37 0.24
UniRef50_Q390R6 Cluster: Outer membrane autotransporter barrel; ... 37 0.24
UniRef50_Q1IEN2 Cluster: Putative outer membrane autotransporter... 37 0.32
UniRef50_A7CVD5 Cluster: Autotransporter-associated beta strand ... 37 0.32
UniRef50_A7CRY0 Cluster: Autotransporter-associated beta strand ... 37 0.32
UniRef50_A6X8H5 Cluster: Outer membrane autotransporter barrel d... 37 0.32
UniRef50_A3KB18 Cluster: Possible serine protease/outer membrane... 36 0.74
UniRef50_A3K1J2 Cluster: Outer membrane autotransporter barrel; ... 36 0.74
UniRef50_A0KE83 Cluster: Outer membrane autotransporter barrel d... 36 0.74
UniRef50_Q5AVG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.74
UniRef50_A7HVK6 Cluster: Outer membrane autotransporter barrel d... 35 1.3
UniRef50_A5Z365 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A4U1Q4 Cluster: HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN... 35 1.3
UniRef50_A4Z0E7 Cluster: Putative haemagglutinin-like (Or adhesi... 34 1.7
UniRef50_Q8U788 Cluster: Serine protease; n=1; Agrobacterium tum... 34 2.3
UniRef50_A7HZ72 Cluster: Outer membrane autotransporter barrel d... 34 2.3
UniRef50_A7CU71 Cluster: Autotransporter-associated beta strand ... 34 2.3
UniRef50_A4WZS3 Cluster: Deoxyuridine 5'-triphosphate nucleotido... 33 3.0
UniRef50_Q2T4D1 Cluster: Serine protease, subtilase family; n=1;... 33 4.0
UniRef50_Q2N5D9 Cluster: Autotransporter; n=1; Erythrobacter lit... 33 4.0
UniRef50_UPI0001555D29 Cluster: PREDICTED: similar to Dipeptidyl... 33 5.2
UniRef50_Q9F285 Cluster: YapH protein; n=15; Yersinia|Rep: YapH ... 33 5.2
UniRef50_Q1LC60 Cluster: Putative uncharacterized protein precur... 33 5.2
UniRef50_Q8GF46 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q7WQ83 Cluster: Autotransporter; n=2; Bordetella|Rep: A... 32 6.9
UniRef50_Q9KJ18 Cluster: PrtB; n=9; Gammaproteobacteria|Rep: Prt... 32 6.9
UniRef50_Q7CS23 Cluster: AGR_L_3085p; n=2; Agrobacterium tumefac... 32 6.9
UniRef50_Q6W1S3 Cluster: Pilus assembly protein, CpaB; n=4; Rhiz... 32 6.9
UniRef50_Q11M33 Cluster: Outer membrane autotransporter barrel d... 32 6.9
UniRef50_A6KZB3 Cluster: Putative lipoprotein; n=1; Bacteroides ... 32 6.9
UniRef50_A3J3A7 Cluster: Putative hemagglutinin-related protein;... 32 6.9
UniRef50_A3I6Q8 Cluster: Ribosome-associated GTPase; n=2; Bacill... 32 6.9
UniRef50_A1IFP6 Cluster: Uncharacterized protein with a C-termin... 32 6.9
UniRef50_Q23H82 Cluster: Putative uncharacterized protein; n=27;... 32 6.9
UniRef50_Q4WNS8 Cluster: Protein ecm33 precursor; n=7; Trichocom... 32 6.9
UniRef50_Q82EY9 Cluster: Putative integrin-like protein; n=1; St... 32 9.2
UniRef50_Q4UJZ8 Cluster: Cell surface antigen-like protein Sca13... 32 9.2
UniRef50_Q2RVL7 Cluster: Cation-transporting ATPase; n=1; Rhodos... 32 9.2
UniRef50_Q0BS30 Cluster: Hemagglutinin-related protein; n=2; Gra... 32 9.2
UniRef50_Q0AKY0 Cluster: Outer membrane autotransporter barrel d... 32 9.2
UniRef50_Q60106 Cluster: Xanthomonalisin precursor; n=2; Proteob... 32 9.2
>UniRef50_A1BIV9 Cluster: Outer membrane autotransporter barrel
domain precursor; n=1; Chlorobium phaeobacteroides DSM
266|Rep: Outer membrane autotransporter barrel domain
precursor - Chlorobium phaeobacteroides (strain DSM 266)
Length = 1971
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHT---------ADGVTGMGSSEVTIANPGTLDILASTNSAG- 101
NTYSG T +N+G L + S+T ADG T ++ VT+AN TL ++ G
Sbjct: 532 NTYSGGTALNEGTLAVGSNTALGSGALSMADGTTLQAAATVTLANNVTLTGTDRFDTDGY 591
Query: 100 DYTLTNALKGDGLMR 56
D +T + G G +R
Sbjct: 592 DMAMTGVISGSGSLR 606
Score = 32.7 bits (71), Expect = 5.2
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHT---------ADGVTGMGSSEVTIANPGTLDILAST--NSA 104
N Y+G T +N+G L S+T ADG T + ++ V +AN TL T A
Sbjct: 1197 NVYAGGTDLNEGTLAAGSNTALGTGALSMADGTTLLAAASVALANNVTLAAGMETVNTQA 1256
Query: 103 GDYTLTNALKGDGLMRVQLSSSDKMFGFTHATG 5
TL+ + G+G + Q + + + G TG
Sbjct: 1257 FSMTLSGDITGEGKLIKQGAGTLTLDGSNSYTG 1289
>UniRef50_UPI00005F8D66 Cluster: COG3468: Type V secretory pathway,
adhesin AidA; n=1; Yersinia frederiksenii ATCC
33641|Rep: COG3468: Type V secretory pathway, adhesin
AidA - Yersinia frederiksenii ATCC 33641
Length = 1005
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -1
Query: 408 NATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFN 256
NA ++ FG GEG VFNH +D YQ D L++G G V+ D G T F+
Sbjct: 441 NANQISFGAGEGRVVFNH---NDTHYQFDHLLSG---TGTVVADNGLTQFS 485
>UniRef50_Q137J7 Cluster: Outer membrane autotransporter barrel
precursor; n=1; Rhodopseudomonas palustris BisB5|Rep:
Outer membrane autotransporter barrel precursor -
Rhodopseudomonas palustris (strain BisB5)
Length = 1019
Score = 39.5 bits (88), Expect = 0.046
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKG 71
NTYSG T++NDG L + + G G +S T+ + GTLD+ A+T + L + +
Sbjct: 356 NTYSGGTVINDGTLKL---SGAGTLGNATSTTTV-HSGTLDLGATTQTQSRVNLYSGMLQ 411
Query: 70 DGLMRVQLSSS 38
+G + + S+
Sbjct: 412 NGNLNASVFSN 422
>UniRef50_Q11KT9 Cluster: Outer membrane autotransporter barrel
domain; n=1; Mesorhizobium sp. BNC1|Rep: Outer membrane
autotransporter barrel domain - Mesorhizobium sp.
(strain BNC1)
Length = 2926
Score = 39.5 bits (88), Expect = 0.046
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALK- 74
NTY+G LVN G+L S A G T ++ T+ + GTLD+ NS G T A+
Sbjct: 233 NTYTGGNLVNSGILRAGSTQAFGNT---ATWTTVNSGGTLDLAGFNNSIGGLIGTGAVSL 289
Query: 73 GDGLMRVQLSSSDKMFGFTHATG 5
G + + S G TG
Sbjct: 290 GSATLTLTNGYSSTFSGTISGTG 312
Score = 33.5 bits (73), Expect = 3.0
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTG-MGSSEVTIA-NPGTLDILASTNSAGDYTLTNAL 77
NTY+G T++NDG L I + G TG +G+ EV +A + G L N + +
Sbjct: 803 NTYTGNTVINDGKLIIGN---GGTTGNVGTGEVILAFSTGVLGF----NRSDTVNFAGKI 855
Query: 76 KGDGLMRVQLSSSDKMFGFTHATGT 2
G G++ Q+ + ++ GT
Sbjct: 856 SGPGIIE-QMGEGTTVLTAVNSAGT 879
>UniRef50_Q3K9R0 Cluster: Outer membrane autotransporter barrel; n=2;
root|Rep: Outer membrane autotransporter barrel -
Pseudomonas fluorescens (strain PfO-1)
Length = 3506
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKG 71
NTYSG T +N G +T+ + G+GS VT+A TLD A A D + L
Sbjct: 1919 NTYSGGTTLNAGTVTLGTSA-----GLGSGAVTVAGAATLDTTAPLVLANDVNVNANLSV 1973
Query: 70 DG 65
G
Sbjct: 1974 AG 1975
Score = 33.9 bits (74), Expect = 2.3
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKG 71
NT+SG T +N+G L I S+TA +G+ +T A TLD AST+ A L+NA+
Sbjct: 678 NTFSGGTALNNGTLIIGSNTA-----LGTGALTTAAGTTLD--ASTSVA----LSNAVAL 726
Query: 70 DGLMRVQLSSSDKMFGFTHATG 5
G + + +++ + G +G
Sbjct: 727 GGNLNIAGNANLTLDGVVSGSG 748
>UniRef50_Q390R6 Cluster: Outer membrane autotransporter barrel;
n=6; Burkholderia cepacia complex|Rep: Outer membrane
autotransporter barrel - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 1115
Score = 37.1 bits (82), Expect = 0.24
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 253 GNTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALK 74
GNTYSG T + G L++A AD G S +T N GTL + +S N A ++
Sbjct: 451 GNTYSGGTTITQGTLSVA---ADNALGAASGGLTF-NGGTLQLGSSFNLASGRAVSITPS 506
Query: 73 GDGLMRVQ 50
G + Q
Sbjct: 507 SSGTIDTQ 514
>UniRef50_Q1IEN2 Cluster: Putative outer membrane autotransporter;
n=1; Pseudomonas entomophila L48|Rep: Putative outer
membrane autotransporter - Pseudomonas entomophila
(strain L48)
Length = 4658
Score = 36.7 bits (81), Expect = 0.32
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADG-----VTGMG----SSEVTIANPGTLDILASTNSAGD 98
NTYSG T + G+LT+ + A G VTG S+ V +AN L+ S + D
Sbjct: 1835 NTYSGGTSLGAGILTLGNAQALGTGGLTVTGAASLDTSANVALANTVALNANLSLPGSND 1894
Query: 97 YTLTNALKGDG 65
TL AL G G
Sbjct: 1895 LTLNGALSGTG 1905
>UniRef50_A7CVD5 Cluster: Autotransporter-associated beta strand
repeat protein precursor; n=1; Opitutaceae bacterium
TAV2|Rep: Autotransporter-associated beta strand repeat
protein precursor - Opitutaceae bacterium TAV2
Length = 484
Score = 36.7 bits (81), Expect = 0.32
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTN 83
NTYSG T +N G L + +G G+ T+ + GTL + N+AG + N
Sbjct: 268 NTYSGSTTINAGTLLVNGTHINGGAIAGAGTYTVNDGGTLGGTGTINTAGANVIIN 323
>UniRef50_A7CRY0 Cluster: Autotransporter-associated beta strand
repeat protein; n=1; Opitutaceae bacterium TAV2|Rep:
Autotransporter-associated beta strand repeat protein -
Opitutaceae bacterium TAV2
Length = 2794
Score = 36.7 bits (81), Expect = 0.32
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -3
Query: 202 ASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFG 23
AS T +G++ N T + + + G+YT N LKG+G + V L+++ F
Sbjct: 2616 ASATITDTNNLGAASTLNLNAPTARLTIAPTATGNYTFANTLKGNGTLAVNLANATDTFT 2675
Query: 22 FTHATGT 2
+ T
Sbjct: 2676 LANNPAT 2682
>UniRef50_A6X8H5 Cluster: Outer membrane autotransporter barrel
domain protein; n=3; Ochrobactrum anthropi ATCC
49188|Rep: Outer membrane autotransporter barrel domain
protein - Ochrobactrum anthropi (strain ATCC 49188 / DSM
6882 / NCTC 12168)
Length = 2906
Score = 36.7 bits (81), Expect = 0.32
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLT 86
NTY+G T +NDG+L + T+D G + VT+ N GTL+ + +SA LT
Sbjct: 580 NTYTGGTFINDGVLKV---TSDANLGAATGAVTL-NGGTLETDGTFSSARKVHLT 630
>UniRef50_A3KB18 Cluster: Possible serine protease/outer membrane
autotransporter; n=1; Sagittula stellata E-37|Rep:
Possible serine protease/outer membrane autotransporter -
Sagittula stellata E-37
Length = 1240
Score = 35.5 bits (78), Expect = 0.74
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -3
Query: 232 TLVNDGLLTIASHTADGVT-----GMGSSEVTIANPGTLDILASTNSAGDYTLTNA 80
T+ NDG +T+ A GV+ G G +T GT+D+ A+ G TLTN+
Sbjct: 952 TITNDGSITVTGGGAGGVSVANDDGAGDDNLTNQGTGTIDVQANNTLNGIDTLTNS 1007
>UniRef50_A3K1J2 Cluster: Outer membrane autotransporter barrel;
n=1; Sagittula stellata E-37|Rep: Outer membrane
autotransporter barrel - Sagittula stellata E-37
Length = 690
Score = 35.5 bits (78), Expect = 0.74
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -3
Query: 232 TLVNDGLLTIASHTADGVT-----GMGSSEVTIANPGTLDILASTNSAGDYTLTNA 80
T+ NDG +T+ A GV+ G G +T GT+D+ A+ G TLTN+
Sbjct: 526 TITNDGSITVTGGGAGGVSVANDDGAGDDNLTNQGTGTIDVQANNTLNGIDTLTNS 581
>UniRef50_A0KE83 Cluster: Outer membrane autotransporter barrel domain
precursor; n=5; Burkholderia cepacia complex|Rep: Outer
membrane autotransporter barrel domain precursor -
Burkholderia cenocepacia (strain HI2424)
Length = 4238
Score = 35.5 bits (78), Expect = 0.74
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADG-----VTGMGS-----SEVTIANPGTLDILAS--TNS 107
NTY G T +N G L++ S+TA G VTG G+ S T+ N TL A+ N
Sbjct: 1770 NTYGGGTTLNSGGLSVGSNTALGSGALNVTGNGTLNASVSGTTLGNAVTLGAGATLGLNG 1829
Query: 106 AGDYTLTNALKGDG 65
A D L+ + G G
Sbjct: 1830 ANDLGLSGTISGSG 1843
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPG-TLDILASTNSAGDYTLTNAL 77
NTY+G T +N G L I + G + GSS V +A G T D+ +T TL+ +
Sbjct: 2340 NTYTGATTINSGTLAIGA----GGSLSGSSPVNLAGAGATFDVSGATTPQTTGTLSGVV 2394
>UniRef50_Q5AVG7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 460
Score = 35.5 bits (78), Expect = 0.74
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -3
Query: 244 YSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNA 80
YSG ND + T+ + T+ T + T AN GT+D+ +TN++ D TL++A
Sbjct: 57 YSGPFFPNDEVSTMNNRTSGITTAPPITSATFANMGTIDMNTNTNNSFD-TLSSA 110
>UniRef50_A7HVK6 Cluster: Outer membrane autotransporter barrel
domain precursor; n=1; Parvibaculum lavamentivorans
DS-1|Rep: Outer membrane autotransporter barrel domain
precursor - Parvibaculum lavamentivorans DS-1
Length = 1782
Score = 34.7 bits (76), Expect = 1.3
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = -1
Query: 480 SPAVGTLNIXXXXXXXXXXXGFITNATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDD 301
S A GTLNI G + NA ++FG G G VFNH ++ D + D ++G
Sbjct: 796 SGATGTLNIGAAEGDAAVAAGTL-NAASLQFGAGTGQIVFNHLDD-DHAFSSD--VSG-- 849
Query: 300 KDGKVIHDAGHTV 262
G+V+H +G T+
Sbjct: 850 -AGEVLHLSGTTI 861
>UniRef50_A5Z365 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 1653
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3
Query: 226 VNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGD 68
VN L T+ HT +G T G V P + + +T + DYTLTNA D
Sbjct: 1284 VNGNLNTVTEHTIEGKTVPGGKVVV---PSSFEKDGTTYNLSDYTLTNAKMND 1333
>UniRef50_A4U1Q4 Cluster: HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN;
n=1; Magnetospirillum gryphiswaldense|Rep:
HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN -
Magnetospirillum gryphiswaldense
Length = 7354
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 214 LLTIASHT-ADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSS 38
+L A+ T A +TG ++ G D+ T +AGDY +TNA + + S+
Sbjct: 1877 ILNAAARTNATTLTGGSGADTLTGGSGGADVAGFTGNAGDYRITNAAGTLSVAALGSGST 1936
Query: 37 DKMFGF 20
D + GF
Sbjct: 1937 DTVSGF 1942
>UniRef50_A4Z0E7 Cluster: Putative haemagglutinin-like (Or
adhesin-like) with a signal peptide and a putative
subtilisin-like serine protease domain; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative
haemagglutinin-like (Or adhesin-like) with a signal
peptide and a putative subtilisin-like serine protease
domain - Bradyrhizobium sp. (strain ORS278)
Length = 2008
Score = 34.3 bits (75), Expect = 1.7
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTL----TN 83
NTY+G T VN G L ++ TA SS T+A+ TL + NS+ DYT +
Sbjct: 897 NTYTGTTTVNSGTLAQSNTTA-------SSAFTVASGATLQV---GNSSFDYTFNPTTAS 946
Query: 82 ALKGDGLMRVQLSSSDKMFGFTHATGT 2
A+ G G ++ ++ ++ F T A+ T
Sbjct: 947 AISGAGTLQ-KIGTNIVTFAGTSASAT 972
Score = 32.3 bits (70), Expect = 6.9
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYT 92
NTY+G T VN G L +++ T+ SS T+A+ TL + NS+ DYT
Sbjct: 1083 NTYTGATTVNSGTLALSNTTS-------SSAFTVASGATLQV---GNSSFDYT 1125
>UniRef50_Q8U788 Cluster: Serine protease; n=1; Agrobacterium
tumefaciens str. C58|Rep: Serine protease -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 660
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSA--GDYT 92
NTY G T+V DG T+ + +AD +G+ V +A GTL + A + A GDYT
Sbjct: 533 NTYGGGTIVRDG--TLVASSAD---ALGTGGVLVAG-GTLSLAAGRDVAIGGDYT 581
>UniRef50_A7HZ72 Cluster: Outer membrane autotransporter barrel
domain precursor; n=1; Parvibaculum lavamentivorans
DS-1|Rep: Outer membrane autotransporter barrel domain
precursor - Parvibaculum lavamentivorans DS-1
Length = 1333
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 408 NATKVEFGLGEGVFVFNHTNNSDAGYQVDM 319
+A V FG G G+ VFNHTNN D + D+
Sbjct: 363 DAASVVFGAGTGMLVFNHTNN-DYAFDADI 391
>UniRef50_A7CU71 Cluster: Autotransporter-associated beta strand
repeat protein; n=1; Opitutaceae bacterium TAV2|Rep:
Autotransporter-associated beta strand repeat protein -
Opitutaceae bacterium TAV2
Length = 1905
Score = 33.9 bits (74), Expect = 2.3
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKG 71
++Y+G T V DGLL + S T + +S + +++ T+ I T S+ + A+ G
Sbjct: 531 HSYTGATRVEDGLLELLSATGTNTAALTTSSIDVSSGATIRINKGTGSS---NVAQAITG 587
Query: 70 DG 65
G
Sbjct: 588 AG 589
>UniRef50_A4WZS3 Cluster: Deoxyuridine 5'-triphosphate
nucleotidohydrolase Dut; n=1; Rhodobacter sphaeroides
ATCC 17025|Rep: Deoxyuridine 5'-triphosphate
nucleotidohydrolase Dut - Rhodobacter sphaeroides ATCC
17025
Length = 994
Score = 33.5 bits (73), Expect = 3.0
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTL 89
N+YSG T V G L IAS TA G ++T+ + GTL+ A S D L
Sbjct: 298 NSYSGGTSVTGGTLAIASDTA---LGAAEGDLTL-DGGTLETTADVTSGRDIQL 347
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTL 89
N+YSG T V G L IAS D G ++T+ + GTL+ A S D L
Sbjct: 393 NSYSGGTSVTGGTLAIAS---DAALGAAEGDLTL-DGGTLETTADVTSGRDIQL 442
>UniRef50_Q2T4D1 Cluster: Serine protease, subtilase family; n=1;
Burkholderia thailandensis E264|Rep: Serine protease,
subtilase family - Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 /CIP 106301)
Length = 1508
Score = 33.1 bits (72), Expect = 4.0
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKG 71
NTYSG T + G + + S A +G+ VT+A P T+D ++ N + L
Sbjct: 706 NTYSGGTTLAGGTVALGSGGA-----LGTGAVTVAAPTTIDTTSAVNLSNAVALNATATV 760
Query: 70 DGLMRVQLSSS 38
G + LS +
Sbjct: 761 GGTQSLTLSGA 771
>UniRef50_Q2N5D9 Cluster: Autotransporter; n=1; Erythrobacter
litoralis HTCC2594|Rep: Autotransporter - Erythrobacter
litoralis (strain HTCC2594)
Length = 1819
Score = 33.1 bits (72), Expect = 4.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 232 TLVNDGLLTIASHTADGVTGMGSSEVTIANP 140
+++NDG +T++S A VTG+G + T A P
Sbjct: 759 SIINDGTITVSSGFAINVTGVGGGDSTAARP 789
>UniRef50_UPI0001555D29 Cluster: PREDICTED: similar to
Dipeptidylpeptidase 3, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Dipeptidylpeptidase
3, partial - Ornithorhynchus anatinus
Length = 747
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 121 RECRAYRGLQWLLHSTPCPLPHLPYETQWSGG 216
RE +GL H TP PLP L T W GG
Sbjct: 567 REKNGLKGLVVWAHPTPTPLPPLSAPTSWRGG 598
>UniRef50_Q9F285 Cluster: YapH protein; n=15; Yersinia|Rep: YapH
protein - Yersinia pestis
Length = 3705
Score = 32.7 bits (71), Expect = 5.2
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = -3
Query: 223 NDGLL--TIASHTADGVTGMGSSEVTIANPGT--LDILASTNSAGDYTLTNALKGDGLMR 56
N+GL T S A G G + + N G+ +D+L N D +L N + GDG +
Sbjct: 2461 NNGLAGQTNISDGASVTLGNGGTIIGTGNLGSSVIDVLGDLNLVADNSLANVISGDGTIN 2520
Query: 55 VQLS---SSDKMFGFTHATGT 2
+ S + F H GT
Sbjct: 2521 TTATVTLSGNSSFSGAHQIGT 2541
>UniRef50_Q1LC60 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia metallidurans CH34|Rep:
Putative uncharacterized protein precursor - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 3714
Score = 32.7 bits (71), Expect = 5.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 238 GKTLVNDGLLTIASHTADGVTGMGSSEVTIANPG 137
G+TL+++G LT+ H DG+T G+ +T G
Sbjct: 587 GQTLLHNGQLTVTDHLGDGMTFSGTPVITFRQNG 620
>UniRef50_Q8GF46 Cluster: Putative uncharacterized protein; n=1;
Zymomonas mobilis|Rep: Putative uncharacterized protein -
Zymomonas mobilis
Length = 2201
Score = 32.3 bits (70), Expect = 6.9
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = -3
Query: 253 GNTYSGKTLVNDGLLTIASHTADGVTGM--GSSEVTIANP----------GTLDILASTN 110
GN +G NDG LT+ + G GS EVT AN G LD + +
Sbjct: 1244 GNNVAGDVTSNDGSLTLDGNAVAGTLAANGGSFEVTSANSDLGSLAGSANGNLDGALNLH 1303
Query: 109 SAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATG 5
+A D T + A+ G G + + L ++ + G TG
Sbjct: 1304 NAKD-TYSGAISGQGSLNI-LGGTETLSGTNTYTG 1336
Score = 31.9 bits (69), Expect = 9.2
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = -3
Query: 253 GNTYSGKTLVNDGLLTIASHTADGVTGM--GSSEVTIANP----------GTLDILASTN 110
GN +G NDG LT+ + G GS EVT AN G LD + +
Sbjct: 1435 GNNVAGDVTNNDGSLTLDGNAVAGTLAANGGSFEVTSANSDLGSLAGSANGNLDGALNLH 1494
Query: 109 SAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATG 5
+A D T + A+ G G + + L ++ + G TG
Sbjct: 1495 NAKD-TYSGAISGQGSLNI-LGGTETLSGTNTYTG 1527
>UniRef50_Q7WQ83 Cluster: Autotransporter; n=2; Bordetella|Rep:
Autotransporter - Bordetella bronchiseptica (Alcaligenes
bronchisepticus)
Length = 2152
Score = 32.3 bits (70), Expect = 6.9
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVT--------GMGSSEVTIANPGTLDILASTNSAGDY 95
NTY+G TL+ +G L + A VT G G +AN GT +A NS G
Sbjct: 1642 NTYAGPTLIKEGRLAVNGSIASPVTIDPGGVLGGTGRVLGAVANSGT---VAPGNSIGTL 1698
Query: 94 TLTNALKGDG 65
T+ G G
Sbjct: 1699 TIVGNYAGTG 1708
>UniRef50_Q9KJ18 Cluster: PrtB; n=9; Gammaproteobacteria|Rep: PrtB -
Pseudomonas fluorescens
Length = 1036
Score = 32.3 bits (70), Expect = 6.9
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTI-ASHTAD------GVTGMGSSEVTIANPGTLDILASTNSAGDYT 92
NTYSG TLVN GLL I S T+D GV G GS + + + +A NS G
Sbjct: 509 NTYSGPTLVNQGLLAINGSVTSDVTVSQNGVVG-GSGRIGSLSAKSGGTVAPGNSIGTLN 567
Query: 91 LTNALKGD--GLMRVQLS--SSDKM 29
+ + D V+LS SSD++
Sbjct: 568 VAGNVTFDAGSTYAVELSPNSSDRI 592
>UniRef50_Q7CS23 Cluster: AGR_L_3085p; n=2; Agrobacterium
tumefaciens str. C58|Rep: AGR_L_3085p - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 1341
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 405 ATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFN 256
A + FG G G VFNH S+ GY + I+G G+V+ +AG T +
Sbjct: 693 ARAIAFGAGNGSIVFNH---SETGYTLSADISG---AGRVVAEAGVTTLS 736
>UniRef50_Q6W1S3 Cluster: Pilus assembly protein, CpaB; n=4;
Rhizobiales|Rep: Pilus assembly protein, CpaB -
Rhizobium sp. (strain NGR234)
Length = 263
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 253 GNTYSGKTLVNDGLLTI---ASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTN 83
G S L N +L + S ADG + +G + A+PG +DI+A+ ++G +L
Sbjct: 162 GKVVSRAVLSNIRVLAVDQTISEGADGTSVVGKTATLEADPGQIDIIAAAEASGTVSLAL 221
Query: 82 ALKGDGL 62
D L
Sbjct: 222 RAVADNL 228
>UniRef50_Q11M33 Cluster: Outer membrane autotransporter barrel domain
precursor; n=1; Mesorhizobium sp. BNC1|Rep: Outer
membrane autotransporter barrel domain precursor -
Mesorhizobium sp. (strain BNC1)
Length = 1519
Score = 32.3 bits (70), Expect = 6.9
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = -3
Query: 250 NTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTN---- 83
NTY+G+T +N G L + G S V AN GTL S D T+T
Sbjct: 888 NTYTGQTRINAGTLQLGDGGKSGSIDHTSGVVVNAN-GTLAFNRSDIKVFDRTITGTGTI 946
Query: 82 ALKGDGLMRVQLSSSDKMFGFTHAT 8
A G GL R+ +S GFT T
Sbjct: 947 AQIGTGLTRLTADNS----GFTGQT 967
>UniRef50_A6KZB3 Cluster: Putative lipoprotein; n=1; Bacteroides
vulgatus ATCC 8482|Rep: Putative lipoprotein -
Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
11154)
Length = 283
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 181 VTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFT 17
+ G EV ++ P + AS S+GD + N LK G + V+ SSS + G T
Sbjct: 97 INGKHKKEVRVSAPAVNSLKAS--SSGDIIIKNGLKTSGKVTVKASSSGDVTGST 149
>UniRef50_A3J3A7 Cluster: Putative hemagglutinin-related protein;
n=1; Flavobacteria bacterium BAL38|Rep: Putative
hemagglutinin-related protein - Flavobacteria bacterium
BAL38
Length = 364
Score = 32.3 bits (70), Expect = 6.9
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = -3
Query: 271 PYGVQ*GNTYSGKTLVNDGLLTIASHTADGVTGMGSS-EVTIANP--GTL--DILASTNS 107
PY TYS L N G S T+ GVTG+ ++ NP GTL ++ + NS
Sbjct: 105 PYNGTITVTYSNSILTNGGAYAAQSITSTGVTGLTATISSGFVNPAGGTLVFNVTGTPNS 164
Query: 106 AGD--YTLTNALKG 71
G+ + L+N + G
Sbjct: 165 TGNAQFNLSNFING 178
>UniRef50_A3I6Q8 Cluster: Ribosome-associated GTPase; n=2;
Bacillus|Rep: Ribosome-associated GTPase - Bacillus sp.
B14905
Length = 356
Score = 32.3 bits (70), Expect = 6.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 181 VTGMGSSEV-TIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHAT 8
++G G +E+ + G L ++ AG TLTNAL G+ LM+V D G H T
Sbjct: 183 ISGEGLTEIQALFTEGVTGALLGSSGAGKSTLTNALCGEMLMKVSDIREDDAKG-RHTT 240
>UniRef50_A1IFP6 Cluster: Uncharacterized protein with a C-terminal
OMP (Outer membrane protein) domain-like; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
Uncharacterized protein with a C-terminal OMP (Outer
membrane protein) domain-like - Candidatus Desulfococcus
oleovorans Hxd3
Length = 1369
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -3
Query: 223 NDGLLTIA----SHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLM 59
N G +TIA ++ + G GM + T+ N GT++I SA DY L+ +G++
Sbjct: 404 NSGTITIAGVAGAYASYGGIGMAGANDTLTNTGTIEIGYLGGSAADYAAPAPLEENGVI 462
>UniRef50_Q23H82 Cluster: Putative uncharacterized protein; n=27;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1553
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 187 DGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMR-VQLSSSDKMFGF 20
+GV+G+GS+ N L +L N GD ++T G GL++ LS+ + GF
Sbjct: 1177 EGVSGLGSALAKYTNLSNLTLLLEQNQIGDESVTGL--GSGLVKCTNLSNLTLILGF 1231
>UniRef50_Q4WNS8 Cluster: Protein ecm33 precursor; n=7;
Trichocomaceae|Rep: Protein ecm33 precursor -
Aspergillus fumigatus (Sartorya fumigata)
Length = 398
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 220 DGLLTIASHTADGVTGMGSSEVT-IANPGTLDILASTNSAGDYTLTN 83
DGL T+ + + +T +GS + T + +LD N AGD T+TN
Sbjct: 98 DGLTTLTTLSFPSLTSVGSIQWTALPQLQSLDFTKGVNEAGDVTITN 144
>UniRef50_Q82EY9 Cluster: Putative integrin-like protein; n=1;
Streptomyces avermitilis|Rep: Putative integrin-like
protein - Streptomyces avermitilis
Length = 481
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 217 GLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDG 65
G +T+ +A G+T G+ +T +PG + S +S G L + + GDG
Sbjct: 373 GAITLLRGSASGLTTTGAVFLTQDSPGVPGAVESVDSFGSQLLASDVNGDG 423
>UniRef50_Q4UJZ8 Cluster: Cell surface antigen-like protein Sca13;
n=26; Rickettsia|Rep: Cell surface antigen-like protein
Sca13 - Rickettsia felis (Rickettsia azadi)
Length = 2199
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 408 NATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTV 262
NA V+FG G GV F+ TN+ AGY ++ IT + ++ G T+
Sbjct: 457 NAVAVDFGAGGGVLEFSGTNS--AGYLLNSPITNGNTGTLNVYTTGTTL 503
>UniRef50_Q2RVL7 Cluster: Cation-transporting ATPase; n=1;
Rhodospirillum rubrum ATCC 11170|Rep:
Cation-transporting ATPase - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 777
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -3
Query: 190 ADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSS 38
ADG+ G+ EV A P T + L +AGD + G GL+RV+++++
Sbjct: 305 ADGLVLSGNGEVDEA-PVTGESLPKAKAAGDGLFAGTINGIGLLRVRVTAA 354
>UniRef50_Q0BS30 Cluster: Hemagglutinin-related protein; n=2;
Granulibacter bethesdensis CGDNIH1|Rep:
Hemagglutinin-related protein - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 3970
Score = 31.9 bits (69), Expect = 9.2
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3
Query: 232 TLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRV 53
TLVN G + + + GVT MG++ TI N GT+ I +TN+A ++ + GL+
Sbjct: 3457 TLVNSGQILGSGSASTGVT-MGAAG-TINNTGTIAITGATNTA-VAIVSGVISNTGLISA 3513
Query: 52 QLSSS 38
+ S
Sbjct: 3514 DIGQS 3518
>UniRef50_Q0AKY0 Cluster: Outer membrane autotransporter barrel domain
precursor; n=1; Maricaulis maris MCS10|Rep: Outer
membrane autotransporter barrel domain precursor -
Maricaulis maris (strain MCS10)
Length = 2886
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 217 GLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSS 41
G TI + ++ VTG G ++++ N + S SA YT T GDG + + +++
Sbjct: 1638 GAFTITATFSESVTGFGLGDLSVGNGAASNF--SATSATAYTATITPAGDGSVTIDVAA 1694
>UniRef50_Q60106 Cluster: Xanthomonalisin precursor; n=2;
Proteobacteria|Rep: Xanthomonalisin precursor -
Xanthomonas sp. (strain T-22)
Length = 827
Score = 31.9 bits (69), Expect = 9.2
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = -3
Query: 253 GNTYSGKTLVNDGLLTIASHTADG-----VTGMGSSEVTIANPGTLDILASTNSAGDYTL 89
G T+SG+T+ N+GL IA D TG G S A + +ST G
Sbjct: 461 GTTWSGETVWNEGLSAIAPSQGDNNQRLWATGGGVSLYEAAPSWQSSVSSSTKRVGPDLA 520
Query: 88 TNALKGDGLMRVQLSSSDKMFGFTHAT 8
+A G + V S++++ G + A+
Sbjct: 521 FDAASSSGALIVVNGSTEQVGGTSLAS 547
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,848,553
Number of Sequences: 1657284
Number of extensions: 11923863
Number of successful extensions: 31061
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 29621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31053
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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