Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0185
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   4.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 267 SQSRGTIVPEGGFTPV 220
           ++   T+VPEG  TP+
Sbjct: 162 AREEATVVPEGSRTPI 177


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 42  DDVRSPTCPLPL 7
           DDVRSP  P PL
Sbjct: 87  DDVRSPGTPGPL 98


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 42  DDVRSPTCPLPL 7
           DDVRSP  P PL
Sbjct: 243 DDVRSPGTPGPL 254


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 77  ASLRGPTTSSD*TQRKNPTMAAREKINVIVQSQG*SLMY 193
           +SLR P +S      K   + +R KIN + Q+    +MY
Sbjct: 236 SSLR-PRSSQKSAPGKRTPLISRAKINTVKQTIAVIVMY 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,399
Number of Sequences: 336
Number of extensions: 2154
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)