Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0185
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 31 0.34
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 31 0.34
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein. 29 1.8
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 4.2
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 4.2
Z78065-4|CAB01514.2| 344|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical pr... 27 5.5
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 27 5.5
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 27 5.5
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 27 5.5
U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis ... 27 7.3
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 7.3
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical pr... 27 9.7
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 9.7
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 27 9.7
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 9.7
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 9.7
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 9.7
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 9.7
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 9.7
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 12 VMDRSVILRHLLNSATDPFNRQPLSEDQLRPATELKERIQQW 137
VMDR+VI RHLL++ +PFNR PLS ++L P +ELK +IQ+W
Sbjct: 929 VMDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEW 970
>Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical protein
T05H10.5b protein.
Length = 984
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 12 VMDRSVILRHLLNSATDPFNRQPLSEDQLRPATELKERIQQW 137
VMDR+VI RHLL++ +PFNR PLS ++L P +ELK +IQ+W
Sbjct: 934 VMDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEW 975
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical protein
T05H10.5a protein.
Length = 980
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 12 VMDRSVILRHLLNSATDPFNRQPLSEDQLRPATELKERIQQW 137
VMDR+VI RHLL++ +PFNR PLS ++L P +ELK +IQ+W
Sbjct: 930 VMDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEW 971
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 18 DRSVILRHLLNSAT-DPFNRQPLSEDQLRPATELKERIQQW 137
DR I++HL DP R+PL+E+++ P LKE I+++
Sbjct: 211 DREEIVQHLRRIGHFDPVTRKPLTENEIIPNYALKEVIEKF 251
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.34
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 18 DRSVILRHLLNSAT-DPFNRQPLSEDQLRPATELKERIQQW 137
DR I++HL DP R+PL+E+++ P LKE I+++
Sbjct: 211 DREEIVQHLRRIGHFDPVTRKPLTENEIIPNYALKEVIEKF 251
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 30.7 bits (66), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 12 VMDRSVILRHLLNSATDPFNRQPLSEDQL 98
+ DR +I++ + + TDP + LSEDQL
Sbjct: 24 IFDRRLIVKFIAENGTDPISHGELSEDQL 52
>Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical
protein C04F12.3 protein.
Length = 597
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 70 TDSLSPRTNYVQRLNSKKE------SNNGSARKNQRNRPKPRLKSDVHNITHIKTNDRCK 231
TDS++PR + + S+ E +++G+ R+ P+L V N+ ++ T R
Sbjct: 462 TDSMAPRVSRISTSESEDEQQPGPSTSSGTRRRRSEWDRNPKLSDSVCNLDYL-TRIRVA 520
Query: 232 SAFGDYC 252
F D C
Sbjct: 521 KIFDDQC 527
>AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein.
Length = 597
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 70 TDSLSPRTNYVQRLNSKKE------SNNGSARKNQRNRPKPRLKSDVHNITHIKTNDRCK 231
TDS++PR + + S+ E +++G+ R+ P+L V N+ ++ T R
Sbjct: 462 TDSMAPRVSRISTSESEDEQQPGPSTSSGTRRRRSEWDRNPKLSDSVCNLDYL-TRIRVA 520
Query: 232 SAFGDYC 252
F D C
Sbjct: 521 KIFDDQC 527
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 SPRTNYVQRLNSKKESNNGSARKNQRNRPKPRLKSDVHNITH 207
S R N +R KKE+ NGS+ ++ + LKSD+H T+
Sbjct: 719 SLRKNSPERSPMKKENTNGSSMHDELDE-NDYLKSDIHPGTY 759
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 SPRTNYVQRLNSKKESNNGSARKNQRNRPKPRLKSDVHNITH 207
S R N +R KKE+ NGS+ ++ + LKSD+H T+
Sbjct: 719 SLRKNSPERSPMKKENTNGSSMHDELDE-NDYLKSDIHPGTY 759
>Z78065-4|CAB01514.2| 344|Caenorhabditis elegans Hypothetical
protein T09E8.5 protein.
Length = 344
Score = 27.5 bits (58), Expect = 5.5
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = -2
Query: 458 YGTRILIYVLFIQFGAIDINQLIQWTPCSRKATTII 351
+ + ++V + AID+ ++ W+PC +I+
Sbjct: 254 FAVPVYVWVTVVLTNAIDLQGIVSWSPCLMSTHSIL 289
>Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical
protein W03C9.6 protein.
Length = 500
Score = 27.5 bits (58), Expect = 5.5
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -1
Query: 432 IIYSIWCHRYQS 397
++++IWCHR+QS
Sbjct: 101 LVFAIWCHRFQS 112
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 33 LRHLLNSATDPFNRQPLSEDQLRPATELKERI 128
LR ++NS +Q L D +R T +KER+
Sbjct: 58 LREIINSVDTQDGKQDLLSDVIRQLTSIKERL 89
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 33 LRHLLNSATDPFNRQPLSEDQLRPATELKERI 128
LR ++NS +Q L D +R T +KER+
Sbjct: 106 LREIINSVDTQDGKQDLLSDVIRQLTSIKERL 137
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 33 LRHLLNSATDPFNRQPLSEDQLRPATELKERI 128
LR ++NS +Q L D +R T +KER+
Sbjct: 106 LREIINSVDTQDGKQDLLSDVIRQLTSIKERL 137
>U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis
abnormal protein 1 protein.
Length = 703
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 85 PRTNYVQRLNSKKESNNGSARKNQRNRPKPRLKSDVHNITHIKTND 222
P+TN V+ + KE N + R PKP K + I +K D
Sbjct: 468 PKTNNVRWTVNGKEINFNNGRITVHQYPKPYGKESILKIKDLKEED 513
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 6 REVMDRSVILRHLLNSATDPFNRQPLSEDQLRPATELK-ERIQQ 134
RE DR+ ++++ LN P N + E+QL + + K E+IQ+
Sbjct: 1000 REDEDRTDLVKYYLNPPPPPKNEVRVQEEQLEGSRKRKLEQIQE 1043
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 61 TPSTDSLSPRTNYVQRLNSKKESNNGSARK 150
TP+T S + +VQ L S ++S N SAR+
Sbjct: 1485 TPATSSSPNNSGFVQDLISSRQSPNLSARR 1514
>Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical
protein F07B10.3 protein.
Length = 328
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 229 YTCR*SLYV*CCVHQTLALALDDYVDFFSRCH--CWILSLSSVAGRSW 92
Y SL+ +++ +A+ YVD F CH W++ + S+A SW
Sbjct: 101 YAMSFSLFALQFLYRYVAVCKPQYVDLFVGCHFYAWVVLILSLA-TSW 147
>Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical
protein F07B10.3 protein.
Length = 328
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 229 YTCR*SLYV*CCVHQTLALALDDYVDFFSRCH--CWILSLSSVAGRSW 92
Y SL+ +++ +A+ YVD F CH W++ + S+A SW
Sbjct: 101 YAMSFSLFALQFLYRYVAVCKPQYVDLFVGCHFYAWVVLILSLA-TSW 147
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3540 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3579
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 61 TPSTDSLSPRTNYVQRLNSKKESNNGSARK 150
TP+T S + +VQ L S ++S N SAR+
Sbjct: 1485 TPATSSSPNNSGFVQDLISSRQSPNLSARR 1514
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3457 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3496
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3778 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3817
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3778 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3817
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3778 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3817
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 45 LNSAT-DPFNRQPLSEDQLRPAT-----ELKERIQQWQRE 146
+++AT D F + +LRPA EL+ER QWQR+
Sbjct: 3473 ISTATLDIFQNDDFRQTKLRPANFKTSDELRERELQWQRD 3512
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,675,191
Number of Sequences: 27780
Number of extensions: 207332
Number of successful extensions: 671
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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