Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0182
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    28   0.058
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 0.058
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
 Frame = +3

Query: 204 YMCLCACYPFINANKIYLRLVTLKSNSNLRPNSSNDLFSCLYQFAYLPRL------TILY 365
           Y+C   CY  +  ++I+  +      S  RP+S     + L  F Y+P +      T  Y
Sbjct: 285 YICN-QCYNTVEESRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTATY 343

Query: 366 DATILISSTGI 398
           D+ ++  +T I
Sbjct: 344 DSFMIYKTTNI 354


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 219 HIDTYICQFTLRSTVGI 169
           HID Y+C   + S VG+
Sbjct: 47  HIDPYLCTHIIYSFVGL 63


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 88  ADLSKIFGWITGYFFNILIL 147
           A+ +KIFGW   + F  ++L
Sbjct: 168 ANFNKIFGWSLIFLFGRIVL 187


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 485 CRITNCVLLSFHAFYKRFGVLITWNKV 405
           CR+  C+L+       R+G    W K+
Sbjct: 61  CRLRKCLLVGMSKSGSRYGRRSNWFKI 87


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 292 DQTPAMTCSVVCTNLLIYP 348
           ++T   TC+++C+   I+P
Sbjct: 61  EETSLATCNMLCSEPAIWP 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 321  CLYQFAYLPRLTILYDATILISSTG 395
            C+Y+FA   R+ ++  A I++  +G
Sbjct: 1140 CVYEFASDERIKLVIKAIIIMILSG 1164


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 351 LTILYDATILISSTGI 398
           L +L+DA + ISS G+
Sbjct: 126 LLLLFDAYLWISSVGV 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,752
Number of Sequences: 336
Number of extensions: 2627
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)