Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0182
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024323-1|ABC86385.1|  250|Drosophila melanogaster IP10821p pro...    29   3.8  
AE014298-2251|AAF48528.1|  377|Drosophila melanogaster CG15914-P...    29   3.8  
BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p pro...    28   6.7  
AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p pro...    28   6.7  
AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid horm...    28   6.7  
AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB...    28   6.7  
AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA...    28   6.7  
AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p pro...    28   8.8  

>BT024323-1|ABC86385.1|  250|Drosophila melanogaster IP10821p
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 216 CACYPFINANKIYLRLVTLKSNSNLRPNSSNDLFSCLYQFAYLPRL 353
           C CYP I  NK+    +  K N     N+SN L   LY F  +PR+
Sbjct: 170 CGCYP-IAPNKLVYPEIYPKENLY---NTSNALTKKLYNFCRMPRV 211


>AE014298-2251|AAF48528.1|  377|Drosophila melanogaster CG15914-PA
           protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 216 CACYPFINANKIYLRLVTLKSNSNLRPNSSNDLFSCLYQFAYLPRL 353
           C CYP I  NK+    +  K N     N+SN L   LY F  +PR+
Sbjct: 297 CGCYP-IAPNKLVYPEIYPKENLY---NTSNALTKKLYNFCRMPRV 338


>BT015951-1|AAV36836.1| 1553|Drosophila melanogaster SD16632p
           protein.
          Length = 1553

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 294 PNSSNDLFSCLYQFAYLPRLTILYDATILISSTGINNDLIPSD*DAESFIKSVK 455
           PN+ +++++CL+ F    +L +LY  T+ ++   ++++ I      E ++  VK
Sbjct: 272 PNALSEVYNCLHYFCQSLQLEVLYTQTLRLNYERLDDNNI----TVEEYVPGVK 321


>AY050240-1|AAK84939.1| 1331|Drosophila melanogaster SD02490p
           protein.
          Length = 1331

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 294 PNSSNDLFSCLYQFAYLPRLTILYDATILISSTGINNDLIPSD*DAESFIKSVK 455
           PN+ +++++CL+ F    +L +LY  T+ ++   ++++ I      E ++  VK
Sbjct: 50  PNALSEVYNCLHYFCQSLQLEVLYTQTLRLNYERLDDNNI----TVEEYVPGVK 99


>AF289997-1|AAG02462.1| 1340|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP170 protein.
          Length = 1340

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 294 PNSSNDLFSCLYQFAYLPRLTILYDATILISSTGINNDLIPSD*DAESFIKSVK 455
           PN+ +++++CL+ F    +L +LY  T+ ++   ++++ I      E ++  VK
Sbjct: 59  PNALSEVYNCLHYFCQSLQLEVLYTQTLRLNYERLDDNNI----TVEEYVPGVK 108


>AE014296-113|AAN11445.1| 1331|Drosophila melanogaster CG12031-PB,
           isoform B protein.
          Length = 1331

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 294 PNSSNDLFSCLYQFAYLPRLTILYDATILISSTGINNDLIPSD*DAESFIKSVK 455
           PN+ +++++CL+ F    +L +LY  T+ ++   ++++ I      E ++  VK
Sbjct: 50  PNALSEVYNCLHYFCQSLQLEVLYTQTLRLNYERLDDNNI----TVEEYVPGVK 99


>AE014296-112|AAF47395.4| 1553|Drosophila melanogaster CG12031-PA,
           isoform A protein.
          Length = 1553

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 294 PNSSNDLFSCLYQFAYLPRLTILYDATILISSTGINNDLIPSD*DAESFIKSVK 455
           PN+ +++++CL+ F    +L +LY  T+ ++   ++++ I      E ++  VK
Sbjct: 272 PNALSEVYNCLHYFCQSLQLEVLYTQTLRLNYERLDDNNI----TVEEYVPGVK 321


>AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p
           protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 418 LGIRSLLIPVDDMRMVASYKMVSRGK*A-NWYKQLNRSLLEFGLRFELDFRVTSL 257
           L +R +L  VDD+  V SY+ + R   A +W+     ++L   LR+  + R+ +L
Sbjct: 226 LELRKMLDGVDDLERVPSYRTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDAL 280


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,062,098
Number of Sequences: 53049
Number of extensions: 431183
Number of successful extensions: 726
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)