Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0179
         (519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   2.7  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   6.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.2  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   6.2  

>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 184 VRSLYKVIIPIYKLVTCINKT*GIFRNFH 98
           +R++  V++  Y+  TC   T G   N H
Sbjct: 449 LRTMLAVLLSSYEFATCAKSTPGALSNAH 477


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 508 VERLSCRNLLGEM 470
           ++R  CRNL+G+M
Sbjct: 231 IDRSECRNLIGDM 243


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 38   AVSTGQIVCRKIAKTKCLIYVKISEDSLCLIYT 136
            AVST  +V   I  T   + VKISE   C IYT
Sbjct: 931  AVSTLGLVWNPILDT---LGVKISEPETCEIYT 960


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 304 TKTMNFLFDGENYK 263
           TKT NFLFD   Y+
Sbjct: 96  TKTSNFLFDLNRYR 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,370
Number of Sequences: 2352
Number of extensions: 8494
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)