Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0179
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-72|AAF47370.1|  409|Drosophila melanogaster CG12313-PA ...    29   2.9  
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    28   6.6  

>AE014296-72|AAF47370.1|  409|Drosophila melanogaster CG12313-PA
           protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 279 TGKTTNRFLTLFKSTKRKMLIPTPI 205
           T K+ NRF   FK   RK L+P P+
Sbjct: 177 TWKSVNRFQRFFKEPSRKKLLPDPL 201


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = -1

Query: 516  KLKWNVLAVETY*EKCRPYPLSLTAQQTSLCTWDKNIYMESIKSSEYSKIR 364
            K  W  + +E   ++C+ +   L     ++ TW+  I+ME+   +  + +R
Sbjct: 1394 KTPWKKIDIENMDQECKKFGRELRGLDKAMQTWEPFIFMEASLKNLMTSLR 1444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,680,896
Number of Sequences: 53049
Number of extensions: 374640
Number of successful extensions: 606
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)