Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0178
         (525 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0369 - 16885918-16886080,16886235-16886671,16886767-168870...    29   2.3  
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809...    27   7.0  

>11_04_0369 -
           16885918-16886080,16886235-16886671,16886767-16887028,
           16887050-16887353,16887771-16888166,16888531-16888579,
           16889303-16889737
          Length = 681

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 221 TKHCSWLSEPLYQNSTK*IDMKFCKYDKSKYTTMIPSTKTL 343
           +K+ SWL EP + N T  I   FCK ++      +PS + L
Sbjct: 487 SKYPSWLGEPSFSNLTT-IKFLFCKSERLPTLGELPSLQFL 526


>02_05_0601 -
           30278455-30278572,30280211-30280676,30280748-30280951,
           30281065-30281220,30281336-30281738
          Length = 448

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 287 FCKYDKSKYTTMIPSTKTLVILIITSNIITLRLV 388
           F + D  KYT+ +     +V ++IT+ I T++L+
Sbjct: 183 FKRVDSLKYTSALSVALAVVFVVITAGITTIKLM 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,009,604
Number of Sequences: 37544
Number of extensions: 185739
Number of successful extensions: 235
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)