Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0176
(527 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 24 2.7
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 2.7
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 3.6
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 24 3.6
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 24 3.6
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.3
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.3
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.3
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.3
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.3
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 6.3
AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic pr... 23 6.3
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 8.4
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.2 bits (50), Expect = 2.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 192 YHTNIFPWQDSNPRPP 145
Y + PWQD N PP
Sbjct: 928 YALRLLPWQDRNNLPP 943
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 2.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTPDGLSSNYS 88
T W D PRPP T ++ T P ++ ++
Sbjct: 169 TTTTTWSDQ-PRPPTTTTTTVWTDPTATTTTHA 200
Score = 22.6 bits (46), Expect = 8.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 171 WQDSNPRPPCVVTMSLTTTP 112
W D P PP T ++ T P
Sbjct: 240 WSDLPPPPPTTTTTTVWTDP 259
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 3.6
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 235 TTTTTWSDQPPPPPTTTTTTVWTDP 259
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 23.8 bits (49), Expect = 3.6
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +3
Query: 183 LYDKYKCIFQGYGCILNICMCIIKSYI 263
+Y ++C +Q YG + ++ SY+
Sbjct: 139 VYKAFQCYYQYYGALSECPQFVVNSYL 165
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 23.8 bits (49), Expect = 3.6
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +3
Query: 183 LYDKYKCIFQGYGCILNICMCIIKSYI 263
+Y ++C +Q YG + ++ SY+
Sbjct: 139 VYKAFQCYYQYYGALSECPQFVVNSYL 165
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDP 259
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDP 259
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDP 258
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDP 258
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDP 259
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -3
Query: 186 TNIFPWQDSNPRPPCVVTMSLTTTP 112
T W D P PP T ++ T P
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDP 259
>AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic
protein protein.
Length = 109
Score = 23.0 bits (47), Expect = 6.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 156 PRPPCVVTMSLTTTPD 109
P+PP ++ L+TTP+
Sbjct: 1 PKPPLTKSLQLSTTPE 16
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 22.6 bits (46), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 513 RYGTP*WFQCINNDEVRDCKSRLVKRI 433
RY P W + +N R+C+ RL++R+
Sbjct: 808 RYAAPVWHEALN---TRECR-RLLERV 830
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,452
Number of Sequences: 2352
Number of extensions: 8700
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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