Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0176
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA...    28   6.8  
U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     28   9.0  
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    28   9.0  
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    28   9.0  
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    28   9.0  
AE013599-1463|AAO41400.1|  879|Drosophila melanogaster CG33012-P...    28   9.0  
AE013599-1462|AAO41399.1|  873|Drosophila melanogaster CG33012-P...    28   9.0  

>AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA
           protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +3

Query: 201 CIFQGYGCI-LNICM---CIIKSYIYFRYLVPVTQVLYEFI 311
           C+  G+GC+ + +C+   C++  YI + Y   + ++LY  I
Sbjct: 154 CVCGGWGCVCVCVCVIGFCVVCVYISYEYNACIIKILYFMI 194


>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 219 HNPGKYIYIYHTNIFPWQDSNPRPPCVVTMSLTT-TPDGLSSN 94
           H    + + +H   +P+  + P PP +VT S T+ T +G SS+
Sbjct: 129 HPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSPTGNGWSSS 171


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 219 HNPGKYIYIYHTNIFPWQDSNPRPPCVVTMSLTT-TPDGLSSN 94
           H    + + +H   +P+  + P PP +VT S T+ T +G SS+
Sbjct: 129 HPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSPTGNGWSSS 171


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 219 HNPGKYIYIYHTNIFPWQDSNPRPPCVVTMSLTT-TPDGLSSN 94
           H    + + +H   +P+  + P PP +VT S T+ T +G SS+
Sbjct: 129 HPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSPTGNGWSSS 171


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 219 HNPGKYIYIYHTNIFPWQDSNPRPPCVVTMSLTT-TPDGLSSN 94
           H    + + +H   +P+  + P PP +VT S T+ T +G SS+
Sbjct: 129 HPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSPTGNGWSSS 171


>AE013599-1463|AAO41400.1|  879|Drosophila melanogaster CG33012-PB,
           isoform B protein.
          Length = 879

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 210 QGYGCILNICMCIIKSYIYFRYL 278
           +GY   L +C+C I  Y+YF YL
Sbjct: 545 KGYLWALVLCVCQILPYLYFTYL 567


>AE013599-1462|AAO41399.1|  873|Drosophila melanogaster CG33012-PA,
           isoform A protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 210 QGYGCILNICMCIIKSYIYFRYL 278
           +GY   L +C+C I  Y+YF YL
Sbjct: 539 KGYLWALVLCVCQILPYLYFTYL 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,025,109
Number of Sequences: 53049
Number of extensions: 358640
Number of successful extensions: 841
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)