Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0175
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   0.93 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 260 SFTH*IHFLLECMVFVATICISI*ACFLNYKTTY 361
           +FTH   F   C  F+A I ++I   F   +  Y
Sbjct: 70  AFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNY 103


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 100 IIFFFHFFQKYLIFFCRLLY 41
           ++  +HFF  ++IF   LL+
Sbjct: 163 LLCIYHFFCAFIIFTMHLLF 182


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 94  FFFHFFQKYLIFFCRLLYKFKANYALMKSR 5
           F   +FQ Y++FF    +       L++ R
Sbjct: 148 FAIEYFQMYVLFFVNFAFFVVVKMLLVRYR 177


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 94  FFFHFFQKYLIFFCRLLYKFKANYALMKSR 5
           F   +FQ Y++FF    +       L++ R
Sbjct: 148 FAIEYFQMYVLFFVNFAFFVVVKMLLVRYR 177


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 100 IIFFFHFFQKYLIFFCRLLYKFKANYALMK 11
           I+ FF  F  YL  F  +       YA++K
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLK 157


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 100 IIFFFHFFQKYLIFFCRLLYKFKANYALMK 11
           I+ FF  F  YL  F  +       YA++K
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLK 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,939
Number of Sequences: 336
Number of extensions: 2245
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)