Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0175
         (520 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023163-1|AAY55579.1|  386|Drosophila melanogaster IP10810p pro...    29   5.0  
BT023091-1|AAY55507.1|  386|Drosophila melanogaster IP10910p pro...    29   5.0  
AE014297-4616|AAF57060.2|  386|Drosophila melanogaster CG15539-P...    29   5.0  
AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-P...    29   5.0  
AY118746-1|AAM50606.1|  739|Drosophila melanogaster GH05829p pro...    28   8.7  
AE013599-3094|AAF46647.5|  739|Drosophila melanogaster CG9313-PA...    28   8.7  

>BT023163-1|AAY55579.1|  386|Drosophila melanogaster IP10810p
           protein.
          Length = 386

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 345 TIKLHIFQICDIILXYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 503
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>BT023091-1|AAY55507.1|  386|Drosophila melanogaster IP10910p
           protein.
          Length = 386

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 345 TIKLHIFQICDIILXYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 503
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>AE014297-4616|AAF57060.2|  386|Drosophila melanogaster CG15539-PA,
           isoform A protein.
          Length = 386

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 345 TIKLHIFQICDIILXYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 503
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 49  TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 99


>AE014297-4615|ABI31220.1|  509|Drosophila melanogaster CG15539-PB,
           isoform B protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 345 TIKLHIFQICDIILXYIYINMHLKICMYKVDILVDHVFCTILM*LNSFFELFV 503
           TI  H+    D I    ++ + LK  MY+ D  +++++  + M L  F+ELFV
Sbjct: 172 TIARHMVNYKDFIRAKEWLMVGLK--MYEADEEIEYIYSQLGMPLVDFYELFV 222


>AY118746-1|AAM50606.1|  739|Drosophila melanogaster GH05829p
           protein.
          Length = 739

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 496 SSKKLFNYIKMVQKTWSTKISTLY 425
           S  ++FN+I M  K W T I TLY
Sbjct: 483 SDGRVFNWILMQNKLWVTTIITLY 506


>AE013599-3094|AAF46647.5|  739|Drosophila melanogaster CG9313-PA
           protein.
          Length = 739

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 496 SSKKLFNYIKMVQKTWSTKISTLY 425
           S  ++FN+I M  K W T I TLY
Sbjct: 483 SDGRVFNWILMQNKLWVTTIITLY 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,389,866
Number of Sequences: 53049
Number of extensions: 312253
Number of successful extensions: 649
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)