Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0174
         (522 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2BJQ9 Cluster: Oxygen-independent coproporphyrinogen I...    33   5.2  

>UniRef50_A2BJQ9 Cluster: Oxygen-independent coproporphyrinogen III
           oxidase; n=1; Hyperthermus butylicus DSM 5456|Rep:
           Oxygen-independent coproporphyrinogen III oxidase -
           Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
          Length = 435

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +1

Query: 334 ERQLLNFRSVSGLSNFGFKHI*FCHTEFTTQCCF*RPIIMEMVYAYFLRAVLQKI 498
           E  +   RS SG     + H+ FCH    T CCF R    E  +  ++ A+LQ+I
Sbjct: 45  EEHVKTIRSASGHYAL-YIHMPFCHRPLCTFCCFVRYPFHEKRHREYIDALLQEI 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,034,668
Number of Sequences: 1657284
Number of extensions: 10118533
Number of successful extensions: 18010
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18009
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)