Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0173
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007426-1|AAP36094.1| 427|Homo sapiens potassium intermediate/... 31 1.8
BC015337-1|AAH15337.1| 427|Homo sapiens potassium intermediate/... 31 1.8
AF305735-1|AAG26917.1| 427|Homo sapiens intermediate-conductanc... 31 1.8
AF033021-1|AAC36804.1| 427|Homo sapiens intermediate conductanc... 31 1.8
AF022797-1|AAC51913.1| 427|Homo sapiens intermediate conductanc... 31 1.8
AF022150-1|AAC23541.1| 427|Homo sapiens hIK1 protein. 31 1.8
AF000972-1|AAB82739.1| 427|Homo sapiens calcium-activated potas... 31 1.8
AF395661-1|AAK81862.1| 427|Homo sapiens potassium intermediate/... 31 3.2
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 29 9.8
BC110315-1|AAI10316.1| 336|Homo sapiens SYTL2 protein protein. 29 9.8
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 29 9.8
BC015540-1|AAH15540.1| 376|Homo sapiens synaptotagmin-like 2 pr... 29 9.8
AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate... 29 9.8
AL834422-1|CAD39083.1| 238|Homo sapiens hypothetical protein pr... 29 9.8
AK131365-1|BAD18516.1| 579|Homo sapiens protein. 29 9.8
AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK074737-1|BAC11170.1| 376|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK024872-1|BAB15030.1| 376|Homo sapiens protein ( Homo sapiens ... 29 9.8
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 29 9.8
AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protei... 29 9.8
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 29 9.8
AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney ... 29 9.8
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 29 9.8
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 29 9.8
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 29 9.8
>BT007426-1|AAP36094.1| 427|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>BC015337-1|AAH15337.1| 427|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF305735-1|AAG26917.1| 427|Homo sapiens intermediate-conductance
calcium-activated potassium channel 1 protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF033021-1|AAC36804.1| 427|Homo sapiens intermediate conductance
calcium-activated potassium channel protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF022797-1|AAC51913.1| 427|Homo sapiens intermediate conductance
calcium-activated potassium channel protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF022150-1|AAC23541.1| 427|Homo sapiens hIK1 protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF000972-1|AAB82739.1| 427|Homo sapiens calcium-activated
potassium channel protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTISISTFLLLCLIVAFH 80
>AF395661-1|AAK81862.1| 427|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 427
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 186 MLLFGTCIYALYLENVVSEIQASSIILRCMMATRH 290
ML FG C +ALYL V I S+ +L C++ H
Sbjct: 46 MLWFGGCSWALYLFLVKCTIGISTFLLLCLIVAFH 80
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>BC110315-1|AAI10316.1| 336|Homo sapiens SYTL2 protein protein.
Length = 336
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 244 IFNHTMVYDGFRPEDLM--EACVELTVWDH 271
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>BC015540-1|AAH15540.1| 376|Homo sapiens synaptotagmin-like 2
protein.
Length = 376
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 284 IFNHTMVYDGFRPEDLM--EACVELTVWDH 311
>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
antigen SGA-72M protein.
Length = 1780
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 1688 IFNHTMVYDGFRPEDLM--EACVELTVWDH 1715
>AL834422-1|CAD39083.1| 238|Homo sapiens hypothetical protein
protein.
Length = 238
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 146 IFNHTMVYDGFRPEDLM--EACVELTVWDH 173
>AK131365-1|BAD18516.1| 579|Homo sapiens protein.
Length = 579
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 487 IFNHTMVYDGFRPEDLM--EACVELTVWDH 514
>AK124754-1|BAC85937.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ42764 fis, clone BRAWH3002821, moderately
similar to Mus musculus synaptotagmin-like 2 (Sytl2). ).
Length = 893
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 801 IFNHTMVYDGFRPEDLM--EACVELTVWDH 828
>AK074737-1|BAC11170.1| 376|Homo sapiens protein ( Homo sapiens
cDNA FLJ90256 fis, clone NT2RM4000417, highly similar to
Synaptotagmin-like protein 2. ).
Length = 376
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 284 IFNHTMVYDGFRPEDLM--EACVELTVWDH 311
>AK024872-1|BAB15030.1| 376|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21219 fis, clone COL00541. ).
Length = 376
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 251 IFNYLALYDGYPPHSVMSAKAVVPSVVWFH 340
IFN+ +YDG+ P +M +A V VW H
Sbjct: 284 IFNHTMVYDGFRPEDLM--EACVELTVWDH 311
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protein
TRIM18 beta protein.
Length = 552
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney
isoform 3 protein.
Length = 630
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 458 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 488
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 254 RCLNLAHDIFKIKRIYTSSEQQHSPRRSTEQ 162
R L ++HD ++R +SS++ H+P R T Q
Sbjct: 495 RKLKVSHDNLTVERDESSSKKSHTPERFTSQ 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,173,115
Number of Sequences: 237096
Number of extensions: 1504517
Number of successful extensions: 2248
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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