Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0169
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   1.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   3.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.2  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -3

Query: 347 RSWAISCG---YRVLWTNGFLLICTKRDSCTA 261
           +SWA   G   YR +  NGFL I + R  C A
Sbjct: 204 QSWASPDGCIVYRCVKENGFLSISSSRKQCPA 235


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 72  VLFEA*RVHKELSESNSGIH 13
           VL+E  R++  L E N G+H
Sbjct: 144 VLYEKIRLNPRLQEENKGVH 163


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +3

Query: 402 LHRFTKRVLPYPQNYKLSRC*IFWCL--AHKIDHVSCFFNY 518
           L+    +++ Y QN+ L R   ++CL    K+D     FN+
Sbjct: 115 LYTTADKIIMYDQNHLLGRA--YFCLLEGDKMDQADAQFNF 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,851
Number of Sequences: 2352
Number of extensions: 11690
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)