Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0169
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 98  ELRSYPVYHDTTHIFVLES 154
           E+R YP Y D T+  V+++
Sbjct: 457 EVRCYPRYDDATNATVIQT 475


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 286 VQKGIPVLQVENE*NRKNYVSNFY 215
           + KG P+++VEN  + +    NFY
Sbjct: 391 ITKGKPLIRVENIIDLEGAPQNFY 414


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 146 TQKYVWCRGTPD 111
           T++ +W RGT D
Sbjct: 432 TEELIWARGTKD 443


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 KRVLPYPQNYKLS 455
           K V PYP N+ LS
Sbjct: 92  KAVAPYPPNHPLS 104


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 KRVLPYPQNYKLS 455
           K V PYP N+ LS
Sbjct: 92  KAVAPYPPNHPLS 104


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 146 TQKYVWCRGTPD 111
           T++ +W RGT D
Sbjct: 522 TEELIWARGTKD 533


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,301
Number of Sequences: 438
Number of extensions: 3514
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)