Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0165
         (520 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q170Q0 Cluster: Serine/threonine protein kinase; n=2; C...    50   3e-05
UniRef50_UPI0000DB76CC Cluster: PREDICTED: similar to serine/thr...    40   0.045
UniRef50_P23647 Cluster: Serine/threonine-protein kinase fused; ...    38   0.10 
UniRef50_Q5KNB1 Cluster: Expressed protein; n=1; Filobasidiella ...    33   3.0  
UniRef50_UPI000049A432 Cluster: Rho guanine nucleotide exchange ...    33   5.2  
UniRef50_UPI0000D57583 Cluster: PREDICTED: similar to Serine/thr...    32   6.8  

>UniRef50_Q170Q0 Cluster: Serine/threonine protein kinase; n=2;
           Culicidae|Rep: Serine/threonine protein kinase - Aedes
           aegypti (Yellowfever mosquito)
          Length = 793

 Score = 50.0 bits (114), Expect = 3e-05
 Identities = 28/83 (33%), Positives = 47/83 (56%)
 Frame = +1

Query: 256 ADVVERILFEDKSFNFINLLEQPNDALRMRVCILISLLCTFSCTAFSAAMETKWSKKESD 435
           A++VE+I+F + + N I +L   +  LR R C+L+ +L  FSC     A++  W+ +  +
Sbjct: 703 AEIVEQIVFHE-NVNLIQMLRHGDSILRHRTCMLLRILARFSC----LALQKHWNNEIKE 757

Query: 436 SLEALHGHCNVTLNRAARLATKE 504
           SLE L    +V +N  A+ A  E
Sbjct: 758 SLENLLEDQDVDINMEAKCALDE 780


>UniRef50_UPI0000DB76CC Cluster: PREDICTED: similar to
           serine/threonine kinase 36; n=1; Apis mellifera|Rep:
           PREDICTED: similar to serine/threonine kinase 36 - Apis
           mellifera
          Length = 800

 Score = 39.5 bits (88), Expect = 0.045
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +2

Query: 44  DRLQGVSRMVEVCAWLCVRSCRGVRQFATALSAYNAYPVFTKLLKLDTRNPRIVLNIVGL 223
           D LQ +  M+ V   L     + + QF  A+   N   +  +LL L+ R  R+V+++V +
Sbjct: 632 DELQTLEYMMLVLCRLVYNRQQFLTQFCDAVYIVNGVTLLQQLLSLEKRKARVVVDLVAI 691

Query: 224 LITILQDLPEQLTL 265
           L  IL+  PE   L
Sbjct: 692 LSNILRSQPENAHL 705


>UniRef50_P23647 Cluster: Serine/threonine-protein kinase fused;
           n=52; Drosophila|Rep: Serine/threonine-protein kinase
           fused - Drosophila melanogaster (Fruit fly)
          Length = 805

 Score = 38.3 bits (85), Expect = 0.10
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +1

Query: 256 ADVVERILFEDKSFNFINLLEQPNDALRMRVCILISLLCTFS 381
           A++VERI+F  +  NF++LL+  +  LR R C L+ LL  FS
Sbjct: 718 AELVERIVFNPR-LNFVSLLQSRHHLLRQRSCQLLRLLARFS 758


>UniRef50_Q5KNB1 Cluster: Expressed protein; n=1; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 561

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +2

Query: 113 VRQFATALSAYNAYPVFTKLLKLDTRNP--RIVLNIVGLLITILQDLPEQLTLSKEYYSR 286
           VRQF T LS++  YP+   ++ L    P   +  N +G L+  L      +T +  +   
Sbjct: 170 VRQFTTYLSSFLTYPIRIPVIGLSPWTPLGNVFENFMGTLVLPLFSAVGTMTAADVWAMP 229

Query: 287 TRVLIS*IYSNSQTTH 334
            R+L+  +++   T+H
Sbjct: 230 VRLLLEYVHTTLGTSH 245


>UniRef50_UPI000049A432 Cluster: Rho guanine nucleotide exchange
           factor; n=1; Entamoeba histolytica HM-1:IMSS|Rep: Rho
           guanine nucleotide exchange factor - Entamoeba
           histolytica HM-1:IMSS
          Length = 452

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 113 VRQFATALSAYNAYPVFTKLLKLDTRNPRIVLNIVGLLITILQDLPEQLTLSKEYYSRT 289
           +R +  A+  Y       K  ++   N +  L + GLLIT +Q +P  + L KEY   T
Sbjct: 96  IRNYDRAIERYGKLLNKKKFQEMANPNDKCSLGLEGLLITPVQRIPRYVLLMKEYMKCT 154


>UniRef50_UPI0000D57583 Cluster: PREDICTED: similar to
           Serine/threonine-protein kinase fused; n=2; Tribolium
           castaneum|Rep: PREDICTED: similar to
           Serine/threonine-protein kinase fused - Tribolium
           castaneum
          Length = 796

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 259 DVVERI-LFEDKSFNFINLLEQPNDALRMRVCILISLLCTFSCTAFSAAMETKWSKKESD 435
           ++V+RI L E KS NF+ LL   N  ++ R C  +  L        +  +E  W++   +
Sbjct: 702 ELVDRIVLSEGKSVNFVELLRHNNPLMQERTCFFLLFL---GKHLPANKVEVFWNETVRE 758

Query: 436 SLEAL 450
           +LEAL
Sbjct: 759 TLEAL 763


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,373,727
Number of Sequences: 1657284
Number of extensions: 9813782
Number of successful extensions: 28042
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27999
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)