Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0165
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   3.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.5  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   8.7  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 402 CCRESGTREGA 370
           CC+ESG RE +
Sbjct: 89  CCQESGEREAS 99


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 373 TFSCTAFSAAMETKWSKKESDS 438
           T S + F   +ET W K   +S
Sbjct: 269 TMSHSQFGNGLETSWGKSRDES 290


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 73  NHTTNTL*SILCSVVIVLTVL 11
           N T N +  I CS  I++T+L
Sbjct: 82  NVTLNDVVFIFCSAPIIITIL 102


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 141 PTTRIRCSLNCLSLTREIP 197
           PTT +  ++NC SLT   P
Sbjct: 313 PTTVMSPTINCWSLTSSPP 331


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 415 WSKKESDSLEALHGHCNVTLNRAARLATKELIICL 519
           W + E D ++      N +L R  + A KE+ + L
Sbjct: 388 WGRSEGDFIKLWDMFQNESLTRLYKKAGKEIPVIL 422


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/62 (20%), Positives = 23/62 (37%)
 Frame = +1

Query: 289 KSFNFINLLEQPNDALRMRVCILISLLCTFSCTAFSAAMETKWSKKESDSLEALHGHCNV 468
           K    + LL       ++  CI+   + T +C         K+S   +     L  +C+V
Sbjct: 20  KVLTILGLLSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTILQRYCSV 79

Query: 469 TL 474
            L
Sbjct: 80  LL 81


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/62 (20%), Positives = 23/62 (37%)
 Frame = +1

Query: 289 KSFNFINLLEQPNDALRMRVCILISLLCTFSCTAFSAAMETKWSKKESDSLEALHGHCNV 468
           K    + LL       ++  CI+   + T +C         K+S   +     L  +C+V
Sbjct: 16  KVLTILGLLSCSFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLAKITTILQRYCSV 75

Query: 469 TL 474
            L
Sbjct: 76  LL 77


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 41  LLRRHCPHCSPR 6
           +LR  CP C+P+
Sbjct: 72  VLRGSCPQCTPQ 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,192
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)