Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0165
         (520 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       29   1.5  
AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.     29   1.5  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U41272-3|ABM01866.1|  186|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...    27   8.0  
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
           protein F58A3.2c protein.
          Length = 1158

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 483 YACLSGNSLGMSMANATLTVNEFMAIHLL 511


>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
           protein F58A3.2e protein.
          Length = 1051

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 483 YACLSGNSLGMSMANATLTVNEFMAIHLL 511


>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
           protein F58A3.2d protein.
          Length = 1096

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 483 YACLSGNSLGMSMANATLTVNEFMAIHLL 511


>Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical
           protein F58A3.2b protein.
          Length = 988

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 431 YACLSGNSLGMSMANATLTVNEFMAIHLL 459


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 483 YACLSGNSLGMSMANATLTVNEFMAIHLL 511


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 483 YACLSGNSLGMSMANATLTVNEFMAIHLL 511


>AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.
          Length = 987

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 510 YELLSGQSCGPVQSNVTMTVERFQTIALL 424
           Y  LSG S G   +N T+TV  F  I LL
Sbjct: 430 YACLSGNSLGMSMANATLTVNEFMAIHLL 458


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 134  LSAYNAYPVFTKLLKLDTRNPRIVLNIVGLLITILQDLPEQLTLSKE--YYSRTRVLI 301
            +  YN +   T   K  + NP    NIV L ++    + +QLT  KE    SR+RV +
Sbjct: 1220 MRVYNQWNFKTVQEKTKSSNPAANPNIVSLTVSTSHSMLDQLTRKKEALVSSRSRVFL 1277


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 26  NDDGAEDRLQGVSRMVEVCA 85
           NDDG  +R QGVS   E+CA
Sbjct: 51  NDDGCNNRKQGVSDGTELCA 70


>U41272-3|ABM01866.1|  186|Caenorhabditis elegans Hypothetical
           protein T03G11.10 protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +2

Query: 17  SEDNDDGAEDRLQGVSRMVEVCAW-LCVRSCRGVRQFATALSAYNAYPVFTKLLKLDTRN 193
           S+  +D      Q  S    V +W  CVRSC      A  LS+ + +  F  L++  TR 
Sbjct: 35  SDITEDNRSAHKQIRSLCTRVKSWETCVRSCSRDNARAILLSSMDQWKKFCALMRKPTRA 94

Query: 194 PRIVLN 211
               LN
Sbjct: 95  SNEYLN 100


>Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical
           protein C14A4.4b protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +2

Query: 95  VRSCRGVRQFATALSAYNAYPVFTKLLKLDTRNPRIVLNIVGLLITILQDLPEQLTLSKE 274
           VR   G+ +       YN+YP F   +K   +    ++N V   I     +P+ +  S E
Sbjct: 44  VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPD-VGSSVE 102

Query: 275 YYS 283
           +Y+
Sbjct: 103 HYT 105


>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +2

Query: 95  VRSCRGVRQFATALSAYNAYPVFTKLLKLDTRNPRIVLNIVGLLITILQDLPEQLTLSKE 274
           VR   G+ +       YN+YP F   +K   +    ++N V   I     +P+ +  S E
Sbjct: 44  VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPD-VGSSVE 102

Query: 275 YYS 283
           +Y+
Sbjct: 103 HYT 105


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +2

Query: 95  VRSCRGVRQFATALSAYNAYPVFTKLLKLDTRNPRIVLNIVGLLITILQDLPEQLTLSKE 274
           VR   G+ +       YN+YP F   +K   +    ++N V   I     +P+ +  S E
Sbjct: 44  VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRVPD-VGSSVE 102

Query: 275 YYS 283
           +Y+
Sbjct: 103 HYT 105


>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
           protein F07G11.9 protein.
          Length = 2025

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 507 ELLSGQSCGPVQSNVTMTVERFQTI 433
           E+ SG SC  + SN  ++VER Q +
Sbjct: 24  EIKSGDSCWNIASNAKISVERLQQL 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,827,429
Number of Sequences: 27780
Number of extensions: 240195
Number of successful extensions: 621
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)