Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0164
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    39   1e-04
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.29 
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    23   8.3  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    23   8.3  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    23   8.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 38.7 bits (86), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -2

Query: 430  HPFSLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALR 299
            +P  +K +YN ++RS+L+Y   +  P  A ++ +++ IQ K  R
Sbjct: 884  NPMCIKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAIQRKLTR 927


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 418 LKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRI 296
           L+ LY AL+R +L+Y + I  P       +++ IQ    R+
Sbjct: 817 LRNLYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRV 857


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 517 RKPHC-YYISDKCEKILNILRCLSGVWW 437
           RK +C  Y   + E+   +LR +SGV+W
Sbjct: 75  RKLNCTLYHPKQREEFSPVLRSMSGVFW 102


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 517 RKPHC-YYISDKCEKILNILRCLSGVWW 437
           RK +C  Y   + E+   +LR +SGV+W
Sbjct: 75  RKLNCTLYHPKQREEFSPVLRSMSGVFW 102


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 517 RKPHC-YYISDKCEKILNILRCLSGVWW 437
           RK +C  Y   + E+   +LR +SGV+W
Sbjct: 75  RKLNCTLYHPKQREEFSPVLRSMSGVFW 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,298
Number of Sequences: 2352
Number of extensions: 12452
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)