Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0164
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X57830-1|CAA40963.1| 471|Homo sapiens serotonin 5-HT2 receptor ... 31 1.9
S71229-1|AAB31320.1| 471|Homo sapiens serotonin2A receptor prot... 31 1.9
S50130-1|AAB24166.2| 114|Homo sapiens 5-hydroxytryptamine recep... 31 1.9
S42168-1|AAB22791.2| 471|Homo sapiens 5-hydroxytryptamine 2 rec... 31 1.9
M86841-1|AAA58354.1| 456|Homo sapiens serotonin receptor protein. 31 1.9
BC096839-1|AAH96839.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
BC074849-1|AAH74849.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
BC074848-1|AAH74848.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
BC069576-1|AAH69576.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
BC069356-1|AAH69356.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
AL160397-1|CAI16877.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
AL136958-3|CAI12227.1| 471|Homo sapiens 5-hydroxytryptamine (se... 31 1.9
AF498982-1|AAM21129.1| 471|Homo sapiens 5-hydroxytryptamine rec... 31 1.9
Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membr... 30 5.7
AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule mem... 30 5.7
>X57830-1|CAA40963.1| 471|Homo sapiens serotonin 5-HT2 receptor
protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>S71229-1|AAB31320.1| 471|Homo sapiens serotonin2A receptor
protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>S50130-1|AAB24166.2| 114|Homo sapiens 5-hydroxytryptamine receptor
protein.
Length = 114
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 35 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 82
>S42168-1|AAB22791.2| 471|Homo sapiens 5-hydroxytryptamine 2
receptor protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>M86841-1|AAA58354.1| 456|Homo sapiens serotonin receptor protein.
Length = 456
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 131 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 178
>BC096839-1|AAH96839.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>BC074849-1|AAH74849.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>BC074848-1|AAH74848.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>BC069576-1|AAH69576.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>BC069356-1|AAH69356.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>AL160397-1|CAI16877.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>AL136958-3|CAI12227.1| 471|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>AF498982-1|AAM21129.1| 471|Homo sapiens 5-hydroxytryptamine
receptor 2A protein.
Length = 471
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 176 YNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQKYLALQAPTHRSQF 33
Y PL +KL ++ +D + T +SL +Y+A+Q P H S+F
Sbjct: 139 YRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRF 186
>Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 146 SLLECMDYPYWTHKSPPCLIVSLQKYLALQAPT 48
S LEC+ WT+K P CL V Q L+AP+
Sbjct: 240 SKLECLASGIWTNKPPQCLAVQCQH---LEAPS 269
>AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 146 SLLECMDYPYWTHKSPPCLIVSLQKYLALQAPT 48
S LEC+ WT+K P CL V Q L+AP+
Sbjct: 240 SKLECLASGIWTNKPPQCLAVQCQH---LEAPS 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,091,313
Number of Sequences: 237096
Number of extensions: 1667120
Number of successful extensions: 2564
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2564
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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