Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0164
(524 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 4e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.008
BT023510-1|AAY84910.1| 1248|Drosophila melanogaster LD09533p pro... 32 0.55
AF145645-1|AAD38620.1| 835|Drosophila melanogaster BcDNA.GH0777... 32 0.55
AE014134-1852|AAF52924.1| 1248|Drosophila melanogaster CG5366-PA... 32 0.55
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 30 2.2
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 30 2.2
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro... 29 3.9
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA... 29 3.9
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 5.1
BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p pro... 28 6.7
AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p pro... 28 6.7
AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA... 28 6.7
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA... 28 6.7
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/92 (31%), Positives = 46/92 (50%)
Frame = -2
Query: 508 HCYYISDKCEKILNILRCLSGVWWGAHPFSLKLLYNALIRSILDYGTFILEPCNAVALHK 329
H + K LNI++CLS + + + +L + A I + L+YG F+ L+K
Sbjct: 753 HINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILNK 812
Query: 328 LDIIQSKALRIIAGAMRSSPINALQSNVLKPP 233
+ + A+R+ GA RS+PIN L PP
Sbjct: 813 IKTPFNSAIRLALGAYRSTPINNLLYESNTPP 844
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = -2
Query: 514 KPHCYYISDKCEKILNILRCLSGVWWGAHPFSLKLLYNALIRSILDYGTFILEPCNAVAL 335
K HC + + E NI++ LS + H +L + AL+ S +DYG I C L
Sbjct: 760 KQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAKSHL 819
Query: 334 HKLDIIQSKALRIIAGAMRSSPI 266
KL + A+R A +SP+
Sbjct: 820 KKLQVPYHGAVRRAIHAFPTSPV 842
>BT023510-1|AAY84910.1| 1248|Drosophila melanogaster LD09533p
protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 421 SLKLLYNALIRSILD-YGTFILEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQSNV 245
SL++ ++ +L GTF+ + A+ LH LD+I +I+ + N LQ+ +
Sbjct: 638 SLRIDLTPILHDVLPALGTFLRKNHRALKLHSLDLIN----KIVINYSSNFEANLLQTAI 693
Query: 244 LK-PPCTSDDNFFVTGFYL 191
++ PP SD + V + L
Sbjct: 694 VEIPPLISDSDLHVAQYSL 712
>AF145645-1|AAD38620.1| 835|Drosophila melanogaster BcDNA.GH07774
protein.
Length = 835
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 421 SLKLLYNALIRSILD-YGTFILEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQSNV 245
SL++ ++ +L GTF+ + A+ LH LD+I +I+ + N LQ+ +
Sbjct: 225 SLRIDLTPILHDVLPALGTFLRKNHRALKLHSLDLIN----KIVINYSSNFEANLLQTAI 280
Query: 244 LK-PPCTSDDNFFVTGFYL 191
++ PP SD + V + L
Sbjct: 281 VEIPPLISDSDLHVAQYSL 299
>AE014134-1852|AAF52924.1| 1248|Drosophila melanogaster CG5366-PA
protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 421 SLKLLYNALIRSILD-YGTFILEPCNAVALHKLDIIQSKALRIIAGAMRSSPINALQSNV 245
SL++ ++ +L GTF+ + A+ LH LD+I +I+ + N LQ+ +
Sbjct: 638 SLRIDLTPILHDVLPALGTFLRKNHRALKLHSLDLIN----KIVINYSSNFEANLLQTAI 693
Query: 244 LK-PPCTSDDNFFVTGFYL 191
++ PP SD + V + L
Sbjct: 694 VEIPPLISDSDLHVAQYSL 712
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 427 PFSLK---LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 284
P SL+ LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 427 PFSLK---LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 284
P SL+ LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 776 PLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 200 FLFRAFQVYNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQ 75
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 200 FLFRAFQVYNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQ 75
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 412 LLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 284
LLYN++++ I YG+ + + + + QSK LR I GA
Sbjct: 786 LLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
>BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p
protein.
Length = 1211
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 17/20 (85%)
Frame = -2
Query: 361 LEPCNAVALHKLDIIQSKAL 302
+EPC ++ H+LD+++S+A+
Sbjct: 8 IEPCRSIGPHELDVVKSQAV 27
>AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p protein.
Length = 1405
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -2
Query: 454 LSGVWWGAH---PFSLKLLYNALIRSILDYGTFIL--EPCNAVALHKLDIIQSKALRIIA 290
LSG+W A P LL+ A + ++LD + E C +A ++Q KALR+
Sbjct: 1065 LSGLWMRAEKTEPIFKALLHQARL-TVLDLSCNFIGNEGCQQLAKSLPTLLQLKALRLQC 1123
Query: 289 GAMRSSPINAL 257
A+ S + AL
Sbjct: 1124 NAIGSHGLEAL 1134
>AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA
protein.
Length = 1211
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/20 (40%), Positives = 17/20 (85%)
Frame = -2
Query: 361 LEPCNAVALHKLDIIQSKAL 302
+EPC ++ H+LD+++S+A+
Sbjct: 8 IEPCRSIGPHELDVVKSQAV 27
>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
protein.
Length = 1405
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -2
Query: 454 LSGVWWGAH---PFSLKLLYNALIRSILDYGTFIL--EPCNAVALHKLDIIQSKALRIIA 290
LSG+W A P LL+ A + ++LD + E C +A ++Q KALR+
Sbjct: 1065 LSGLWMRAEKTEPIFKALLHQARL-TVLDLSCNFIGNEGCQQLAKSLPTLLQLKALRLQC 1123
Query: 289 GAMRSSPINAL 257
A+ S + AL
Sbjct: 1124 NAIGSHGLEAL 1134
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,225,281
Number of Sequences: 53049
Number of extensions: 493235
Number of successful extensions: 1120
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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