Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0163
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q11JC6 Cluster: Putative uncharacterized protein; n=2; ... 34 1.7
UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q11NE4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q38EW8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q8IKU4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_A4BX35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A3ZP05 Cluster: TPR domain protein; n=1; Blastopirellul... 32 6.8
UniRef50_Q8DBI3 Cluster: Sodium-dependent transporter; n=50; Vib... 31 9.0
UniRef50_A0H3P6 Cluster: Putative uncharacterized protein; n=2; ... 31 9.0
>UniRef50_Q11JC6 Cluster: Putative uncharacterized protein; n=2;
Rhizobiales|Rep: Putative uncharacterized protein -
Mesorhizobium sp. (strain BNC1)
Length = 240
Score = 33.9 bits (74), Expect = 1.7
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = -2
Query: 306 LETWYP-CRKYMYLLDRLNL-YECWHSLHQLRGR***QSLWG*EIIMLILNAQRYGR-VQ 136
++TW CR Y Y+ D+++L Y W + +L +LW E I+LILN + + R Q
Sbjct: 125 IDTWCKYCRDYPYIWDQVSLGYAWWDTSLRLN----LNTLWLDERILLILNRKSFKRFFQ 180
Query: 135 LVYV*R*LMHKQK 97
+ + ++HKQ+
Sbjct: 181 IAFNQAAIIHKQE 193
>UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 44
Score = 33.9 bits (74), Expect = 1.7
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2
Query: 180 IIMLILNAQRYGRVQLVY 127
II+LILNAQR GRVQLVY
Sbjct: 10 IIILILNAQRSGRVQLVY 27
>UniRef50_Q11NE4 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 457
Score = 33.5 bits (73), Expect = 2.2
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -3
Query: 314 PIDSKLGIHVENTC-----TYWIG*IYMSVGTPYTSCGGVNDDNLCG 189
P DS +GI +TC T+ I +S G PY S GG ND + G
Sbjct: 45 PQDSGIGIQFTDTCTLLNNTFLINDSLVSTGPPYLSFGGYNDASFTG 91
>UniRef50_Q38EW8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 48
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 47 CAFFGWRLSTCCVLLYNFCLCINYLY 124
CAFF W + CC + FC C +Y Y
Sbjct: 12 CAFFFWHVMCCCCSI--FCKCCHYYY 35
>UniRef50_Q8IKU4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1923
Score = 32.3 bits (70), Expect = 5.2
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 68 LSTCCVLLYNFCLCINYLYTYTSCTRPYRW-AFKINI 175
LS+ CVL Y IN LYTY Y W F IN+
Sbjct: 1545 LSSLCVLKYKIYFFINTLYTYFQWILTYSWNRFLINL 1581
>UniRef50_A4BX35 Cluster: Putative uncharacterized protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative uncharacterized
protein - Polaribacter irgensii 23-P
Length = 213
Score = 31.9 bits (69), Expect = 6.8
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 21 IFLLRYLYNARSSVGVLVRVVFYFIIFVCALTI 119
+FL+R++ + R + ++ +FYFI+++CA I
Sbjct: 170 LFLVRFVLHIRHNKNLVFNELFYFILYLCAFEI 202
>UniRef50_A3ZP05 Cluster: TPR domain protein; n=1; Blastopirellula
marina DSM 3645|Rep: TPR domain protein -
Blastopirellula marina DSM 3645
Length = 1429
Score = 31.9 bits (69), Expect = 6.8
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 254 FSLSSKYMYFLHGYQVSSQSDAWSVVITE 340
F+++S +YFLH QV+ QSDA+ + TE
Sbjct: 16 FAVASLAIYFLHAVQVTRQSDAYLLHATE 44
>UniRef50_Q8DBI3 Cluster: Sodium-dependent transporter; n=50;
Vibrionales|Rep: Sodium-dependent transporter - Vibrio
vulnificus
Length = 454
Score = 31.5 bits (68), Expect = 9.0
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 12 TL*IFLLRYLYNARSSVGVLVRVVFYFIIFVCALTIFIHILAVPVRIAG 158
TL +L ++++ +G + VVF+ ++ + ALT I +L PV + G
Sbjct: 300 TLVFTVLPLMFDSLGLLGQIFAVVFFLLLTIAALTSSISMLECPVALVG 348
>UniRef50_A0H3P6 Cluster: Putative uncharacterized protein; n=2;
Chloroflexus|Rep: Putative uncharacterized protein -
Chloroflexus aggregans DSM 9485
Length = 148
Score = 31.5 bits (68), Expect = 9.0
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 42 YNARSSVGVLVRVVFYFIIFVCALTIFIHILAVPVRIAGHXXXXXXXXXXXXIVIINAPA 221
YN+R ++ L+ + +I+F L +LAVP + GH +V
Sbjct: 68 YNSRLAIASLIFGIMTWILFFIPL-----LLAVPAIVCGHLGQEAIKRSNGMVVGNGLAV 122
Query: 222 TGVGSANTHINLAYPVSTCI 281
G+G THI L V+ C+
Sbjct: 123 LGLGLGYTHIALTL-VALCV 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,217,698
Number of Sequences: 1657284
Number of extensions: 8725190
Number of successful extensions: 18389
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18366
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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