Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0163
         (460 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   4.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   4.8  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   4.8  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   8.5  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 83  VLLYNFCLCIN 115
           V+++ FC+C+N
Sbjct: 5   VVIFAFCICVN 15


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 83  VLLYNFCLCIN 115
           V+++ FC+C+N
Sbjct: 5   VVIFAFCICVN 15


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 83  VLLYNFCLCINYL 121
           VL++ FC+C+  L
Sbjct: 5   VLIFGFCVCVGAL 17


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 157 PAIRTGTASICI 122
           P+IR GT S C+
Sbjct: 26  PSIRQGTTSYCL 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,963
Number of Sequences: 438
Number of extensions: 2875
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)