Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0159
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 28 0.058
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 1.6
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 2.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 6.6
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 6.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 6.6
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 8.7
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 8.7
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 8.7
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 27.9 bits (59), Expect = 0.058
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 142 SYHGNTGRDLTVPSRFDICHFVLLLERDGTCILTVYAKLCIIANP 276
+Y G TGR TV C+F++L IL YA L NP
Sbjct: 305 TYFGKTGRK-TVLKTNKYCNFIILFYLSVFVILVYYASLDETPNP 348
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = -2
Query: 208 RQSDRCQIATAPSNRDPCCRGKNSKTNGLVSN 113
R+ D + + P PC G N G SN
Sbjct: 21 REDDVLLVKSEPQLHSPCATGSNGLPAGAGSN 52
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 410 EHVAAIRGAVCTILTKYHAITHRNRCLRLLTPCHLGRRVW 291
E+V ++ + TK H T R R ++ + GR VW
Sbjct: 60 EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVW 99
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 410 EHVAAIRGAVCTILTKYHAITHRNRCLRLLTPCHLGRRVW 291
E+V ++ + TK H T R R ++ + GR VW
Sbjct: 374 EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVW 413
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 410 EHVAAIRGAVCTILTKYHAITHRNRCLRLLTPCHLGRRVW 291
E+V ++ + TK H T R R ++ + GR VW
Sbjct: 607 EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVW 646
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 410 EHVAAIRGAVCTILTKYHAITHRNRCLRLLTPCHLGRRVW 291
E+V ++ + TK H T R R ++ + GR VW
Sbjct: 607 EYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVW 646
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 285 PAPYPSP*VTRREKTKASVPVSD 353
P P P P VT A P++D
Sbjct: 176 PPPQPEPPVTFNSLNGAHTPLTD 198
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 293 WGRNG*GLAMIHNLA*TVNIQVPS 222
W R G G MI+ NIQ P+
Sbjct: 593 WFRYGNGALMINQWENVTNIQCPN 616
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 293 WGRNG*GLAMIHNLA*TVNIQVPS 222
W R G G MI+ NIQ P+
Sbjct: 593 WFRYGNGALMINQWENVTNIQCPN 616
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/47 (21%), Positives = 19/47 (40%)
Frame = -2
Query: 517 ITVVLIXX*ILLFMFDSNPATSWQPRATETSTRCASNMLPRFAAPYV 377
I+V ++ +L+F + S WQ + R + P P +
Sbjct: 209 ISVFMVPLVVLIFTYTSICIEIWQSSESSLRPRSSQKSAPGKRTPLI 255
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 20.6 bits (41), Expect = 8.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = -1
Query: 116 EQSPARTGPLPVPNQLAAGTTL*PLV*EPSPRPEPLS 6
++SP P N G+ L+ PSP PL+
Sbjct: 240 KESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLA 276
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 354 NHSPEPMPSSSH 319
N+ PEP+PS+ +
Sbjct: 202 NYGPEPVPSTPY 213
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,164
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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