Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0159
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040503-1|AAH40503.1| 490|Homo sapiens membrane targeting (tan... 33 0.61
AK093876-1|BAC04238.1| 490|Homo sapiens protein ( Homo sapiens ... 33 0.61
AL137622-1|CAB70847.1| 626|Homo sapiens hypothetical protein pr... 29 9.9
AL133072-1|CAB61395.1| 916|Homo sapiens hypothetical protein pr... 29 9.9
AL133048-1|CAB61375.1| 1028|Homo sapiens hypothetical protein pr... 29 9.9
AL133040-1|CAB61368.1| 1350|Homo sapiens hypothetical protein pr... 29 9.9
AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein prot... 29 9.9
AJ132440-1|CAB43532.1| 1544|Homo sapiens PLU-1 protein protein. 29 9.9
AF087481-1|AAD16061.1| 1580|Homo sapiens retinoblastoma binding ... 29 9.9
AB015348-1|BAA34803.1| 431|Homo sapiens HRIHFB2060 protein. 29 9.9
>BC040503-1|AAH40503.1| 490|Homo sapiens membrane targeting
(tandem) C2 domain containing 1 protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 106 GDCSKPIR*FLNSYHGNTGRDLTVPSRFDICHFVLLLERDGTCILTVYAKLCIIANPYPF 285
G+CS +R L++ + D+T PS+ +CH L L GTC V +++ + +
Sbjct: 322 GECSMSLR-TLSTQEMDYSLDITPPSKISVCHAELEL---GTCFQAVNSRIQLQILEARY 377
Query: 286 LPHTLLP 306
LP + P
Sbjct: 378 LPSSSTP 384
>AK093876-1|BAC04238.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ36557 fis, clone TRACH2009006. ).
Length = 490
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 106 GDCSKPIR*FLNSYHGNTGRDLTVPSRFDICHFVLLLERDGTCILTVYAKLCIIANPYPF 285
G+CS +R L++ + D+T PS+ +CH L L GTC V +++ + +
Sbjct: 322 GECSMSLR-TLSTQEMDYSLDITPPSKISVCHAELEL---GTCFQAVNSRIQLQILEARY 377
Query: 286 LPHTLLP 306
LP + P
Sbjct: 378 LPSSSTP 384
>AL137622-1|CAB70847.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 459 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 488
>AL133072-1|CAB61395.1| 916|Homo sapiens hypothetical protein
protein.
Length = 916
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 749 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 778
>AL133048-1|CAB61375.1| 1028|Homo sapiens hypothetical protein
protein.
Length = 1028
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 861 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 890
>AL133040-1|CAB61368.1| 1350|Homo sapiens hypothetical protein
protein.
Length = 1350
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 1183 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 1212
>AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein protein.
Length = 1681
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 1514 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 1543
>AJ132440-1|CAB43532.1| 1544|Homo sapiens PLU-1 protein protein.
Length = 1544
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 1377 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 1406
>AF087481-1|AAD16061.1| 1580|Homo sapiens retinoblastoma binding
protein 2 homolog 1 protein.
Length = 1580
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 1413 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 1442
>AB015348-1|BAA34803.1| 431|Homo sapiens HRIHFB2060 protein.
Length = 431
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 211 ARQSDRCQIATAPSNRDPCCRGKNSKTNGL 122
A+Q+DR S ++ CCRGK N L
Sbjct: 297 AQQTDRSSPVRPSSEKNDCCRGKRDGINSL 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,204,717
Number of Sequences: 237096
Number of extensions: 1883793
Number of successful extensions: 4695
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4693
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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