Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0159
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-2|CAA92972.2|  193|Caenorhabditis elegans Hypothetical pr...    34   0.054
Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical pr...    31   0.50 
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z77660-1|CAB01175.1|  162|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AF099917-9|AAC68787.1|  445|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z68751-2|CAA92972.2|  193|Caenorhabditis elegans Hypothetical
           protein T05E11.2 protein.
          Length = 193

 Score = 34.3 bits (75), Expect = 0.054
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +1

Query: 124 IR*FLNSYHGNTGRDLTVPSR-----FDICHFVLLLERDGTCILTVYAKLCIIANPYPFL 288
           +R ++NS H   G   T PSR     F++   +L+    G CIL +   +C I   +  L
Sbjct: 46  LRNYINSAHCQEGGSHTQPSRDCFGDFELASIILISASLGCCILAICFAICTIFTSFGAL 105

Query: 289 PHTLL 303
            H+++
Sbjct: 106 AHSVV 110


>Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC443.5 protein.
          Length = 533

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 16/71 (22%), Positives = 32/71 (45%)
 Frame = -1

Query: 503 NLXLNFIIYVRFEPSDXVAA*GYGNQHEVRVEHVAAIRGAVCTILTKYHAITHRNRCLRL 324
           NL  + + Y   EP+      G  + H+ ++  VA ++  +  + TKY   +   + L +
Sbjct: 171 NLFKDAVKYAHGEPAAISYYPGLFSPHDDKMSFVARVKNMITMLFTKYLYGSRYEKELEM 230

Query: 323 LTPCHLGRRVW 291
           + P + G   W
Sbjct: 231 IKPYYNGTETW 241


>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical protein
            W02B8.2 protein.
          Length = 1256

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 342  EPMPSSSHAVSLR-EKGMGQEWIRISDDTQLSVDRQYTGT 226
            E +P   H  ++R  +  GQ ++ +SDDTQL + R+Y  T
Sbjct: 1027 EVLPEFGHVHTIRYHQQDGQRFLLVSDDTQLHI-RKYNST 1065


>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
            F33H2.5 protein.
          Length = 2144

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +1

Query: 190  DICHFVLLLERDGTCI---LTVYAKLCIIANPYPFLPH 294
            D+  +   LER G+CI   +T+ A L  I+NP P +PH
Sbjct: 1105 DMLDWDYYLERFGSCIQKIITIPAALQGISNPVPRVPH 1142


>Z77660-1|CAB01175.1|  162|Caenorhabditis elegans Hypothetical
           protein F38H4.1 protein.
          Length = 162

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 258 QLSVDRQYTGTVPFEKQDKVTDVKSRR 178
           QLS+DRQ+TG+ P E  D+    K  R
Sbjct: 30  QLSIDRQWTGSTPAE-TDRFATTKDHR 55


>AF099917-9|AAC68787.1|  445|Caenorhabditis elegans Hypothetical
           protein F54D10.9 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 375 YFNKISCNHSPEPMPSSSHAVSL-REKGMGQE 283
           YFNK++C  +P+P  S ++ + +  E   GQ+
Sbjct: 325 YFNKVTCRRAPDPPTSCTNCLPVYNELCYGQD 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,701
Number of Sequences: 27780
Number of extensions: 274716
Number of successful extensions: 780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)