Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0157
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   2.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 287 CPSNLNRTTCIIDLL 243
           CPS  N T C ID +
Sbjct: 403 CPSGTNGTNCEIDTI 417


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 296 MRMTLQHHLRWK 331
           + MTL HH R+K
Sbjct: 69  LEMTLAHHCRFK 80


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 309 SVILIYWLPIKSESHYLHY 253
           +VIL Y++ +  E  Y HY
Sbjct: 183 TVILPYFINLLMELQYCHY 201


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 309 SVILIYWLPIKSESHYLHY 253
           +VIL Y++ +  E  Y HY
Sbjct: 183 TVILPYFINLLMELQYCHY 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,169
Number of Sequences: 336
Number of extensions: 2300
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)