Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0157
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    26   0.67 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   4.7  
AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical prote...    23   8.3  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 25/96 (26%), Positives = 35/96 (36%)
 Frame = -2

Query: 412 WSILKIIKFTLGTLLRSAVGKPLLCRPLPSQVMLECHSHLLVAHQI*IALPAL*TCSITI 233
           W  +  + FT GT L +       C  +   V L  H    VA        A    +  I
Sbjct: 211 WPTIYTLGFTGGTKLLTIFSNVKYCSAMLKLVALRIHCLARVAQD-----RAEKELNEII 265

Query: 232 SIHQFPERCVFLYFELYNCVILT*YFQINVFVFSLL 125
           S+HQ    CVFL    +  V    + Q  +   SL+
Sbjct: 266 SMHQRVLNCVFLLETTFRWVFFVQFIQCTMIWCSLI 301


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 415 RWSILKIIKFTLGTLLRSAVGKPLLCRP 332
           RW I+ I  ++    +R AVG+ LL RP
Sbjct: 191 RWRIISIYSYSNHVYIRFAVGE-LLQRP 217


>AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical protein
           13 protein.
          Length = 56

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 167 QDNAIVQFKIKKHTPLRKLM 226
           Q N I+Q  +K+  PLR+L+
Sbjct: 21  QGNEIIQNVVKRSIPLRQLI 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,402
Number of Sequences: 2352
Number of extensions: 9511
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)