Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0157
(524 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 95 7e-20
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 95 7e-20
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 95 7e-20
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 95 7e-20
AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p pro... 29 3.9
AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA... 29 3.9
BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p pro... 29 5.1
AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein... 29 5.1
AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB... 29 5.1
AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA... 29 5.1
AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p pro... 28 6.7
AE013599-2934|AAF57531.1| 242|Drosophila melanogaster CG15905-P... 28 6.7
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/48 (91%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGL 253
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 256 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 372
MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 50 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/48 (91%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGL 253
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 256 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 372
MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 50 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/48 (91%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGL 253
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 256 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 372
MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 50 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/48 (91%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGL 253
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 256 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 372
MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 50 MQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p
protein.
Length = 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 259 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 351
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418
>AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA
protein.
Length = 424
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 259 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 351
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
>BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p
protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
>AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein
protein.
Length = 660
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
HSNI +G G N+ LP RRS SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419
>AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB,
isoform B protein.
Length = 657
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
HSNI +G G N+ LP RRS SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416
>AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA,
isoform A protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
>AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p
protein.
Length = 163
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 142 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACARA 2
F+ + L HFE+ VL + K++W+L ++N + A A
Sbjct: 88 FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134
>AE013599-2934|AAF57531.1| 242|Drosophila melanogaster CG15905-PA
protein.
Length = 242
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 289 PINENDTPTSLEMEEGDTIEVYQQQTG 369
PI E +TPT+ EM + + Q+QTG
Sbjct: 18 PIEEAETPTTSEMPDSGRVVFDQRQTG 44
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,975,976
Number of Sequences: 53049
Number of extensions: 397332
Number of successful extensions: 784
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -