Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0157
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   3.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   3.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   4.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   7.7  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 524 FHKITSNTFTDTNDVSLKLT 465
           FH++TSNTF D +    KLT
Sbjct: 226 FHRLTSNTF-DYDPRYTKLT 244


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 277 FDGQPINENDTPTSLEM 327
           FDG  I EN+ P  LE+
Sbjct: 178 FDGDFITENNLPLGLEV 194


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 524 FHKITSNTF 498
           FH++TSNTF
Sbjct: 223 FHRLTSNTF 231


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 524 FHKITSNTF 498
           FH++TSNTF
Sbjct: 223 FHRLTSNTF 231


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 524 FHKITSNTF 498
           FH++TSNTF
Sbjct: 224 FHRLTSNTF 232


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 524 FHKITSNTF 498
           FH++TSNTF
Sbjct: 223 FHRLTSNTF 231


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 524 FHKITSNTF 498
           FH++TSNTF
Sbjct: 221 FHRLTSNTF 229


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 288 LPIKSESHYLHYRPALSQ 235
           LPI    H+LH+   L Q
Sbjct: 67  LPIYQSHHHLHHHQVLYQ 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,858
Number of Sequences: 438
Number of extensions: 2373
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)