Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0155
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.2  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 216 VVIWFPTMYKERILQTLFY 160
           +++WFP  YK+ ++  L Y
Sbjct: 150 LIVWFPFDYKQPVVFDLVY 168


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 262 VACCLVAMFICSNQKSSYMVPY 197
           V CCL+ MF  ++  SS    Y
Sbjct: 6   VVCCLLLMFSYTDNVSSTRTKY 27


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 62  RNRSAVTLFGSVNAWPRNIVPKSTTTFQSSNYS*NNVCSILSLYI 196
           + R    +  S++++  N++ +    F SS+YS     ++L L +
Sbjct: 230 QGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLL 274


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 62  RNRSAVTLFGSVNAWPRNIVPKSTTTFQSSNYS*NNVCSILSLYI 196
           + R    +  S++++  N++ +    F SS+YS     ++L L +
Sbjct: 230 QGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLL 274


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 469 CDLLVIFIIY*CDFLNLFLH 410
           C+L  + +++   FLN  LH
Sbjct: 136 CELFFVILLWISFFLNFMLH 155


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 218 K*LYGSLLCTRKEYYKHYFMNN*KIGM*LSILARCFW 108
           K +Y SLLCT K  +      N  I   ++I    FW
Sbjct: 69  KSVYASLLCTEK-IFLFAIYTNLSILTTVTIFKSAFW 104


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
          protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 38 TPKWNCCRKAS 6
          TP+W C R +S
Sbjct: 52 TPRWGCARASS 62


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +2

Query: 92  SVNAWPRNIVPKSTTTFQSSNYS*NNVCSILSLYIVGNHITTFL 223
           S N W    +  S     +  YS +N CS    + + N  T F+
Sbjct: 193 SANQWYSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPNKRTVFI 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,631
Number of Sequences: 336
Number of extensions: 3350
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)