Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0155
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 197 VGNHITTFLIAAYKHGYQATC 259
           VG  +T F   AYK G ++TC
Sbjct: 196 VGYKVTGFEELAYKMGLESTC 216


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 343 ATSIFKCLLSPCTDIKFFYFNV 278
           A+S+F  LL P   + F YF +
Sbjct: 11  ASSVFLSLLIPALILYFIYFRI 32


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 598 MYRIINYSVKYILLETF 648
           MY  +NY+++ ++++TF
Sbjct: 1   MYGFVNYALELLVVKTF 17


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 598 MYRIINYSVKYILLETF 648
           MY  +NY+++ ++++TF
Sbjct: 1   MYGFVNYALELLVVKTF 17


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 37  VFYSYLKLKEQECRNIVWISECVAQKHRAKIDNY 138
           V+    ++ +    NI W +E  A    A ID+Y
Sbjct: 40  VYNLLYRVAQPALANITWYNEGQAWNIEANIDSY 73


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 37  VFYSYLKLKEQECRNIVWISECVAQKHRAKIDNY 138
           V+    ++ +    NI W +E  A    A ID+Y
Sbjct: 40  VYNLLYRVAQPALANITWYNEGQAWNIEANIDSY 73


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 358 FLKSIATSIFKCLLSPCTDIK 296
           F K I  +  +C+  PCT ++
Sbjct: 102 FRKVITKAPLECMCRPCTSVE 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,056
Number of Sequences: 438
Number of extensions: 3397
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)