Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0154
(695 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep: His... 148 1e-34
UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histo... 127 3e-28
UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Hist... 124 3e-27
UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep: His... 119 6e-26
UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268; Eukaryota|... 101 1e-20
UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histo... 99 5e-20
UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep: His... 99 5e-20
UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep: His... 99 9e-20
UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7; Trypanosoma... 93 6e-18
UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n... 89 7e-17
UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179; Eukary... 89 1e-16
UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74; Eukaryo... 86 7e-16
UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis elegan... 84 3e-15
UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba hist... 82 1e-14
UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333, ... 82 1e-14
UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma japonicum... 75 2e-12
UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family prote... 74 3e-12
UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoid... 74 4e-12
UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep... 73 7e-12
UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1; ... 73 9e-12
UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406 ... 68 3e-10
UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Re... 67 4e-10
UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, wh... 66 1e-09
UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia intestinalis|... 65 1e-09
UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoid... 65 1e-09
UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium longiflorum|... 65 1e-09
UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 61 3e-08
UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium longiflorum|... 61 3e-08
UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;... 58 2e-07
UniRef50_UPI0000ECC705 Cluster: UPI0000ECC705 related cluster; n... 58 2e-07
UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;... 58 3e-07
UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep: Hi... 57 5e-07
UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein; ... 56 6e-07
UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla grou... 55 1e-06
UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole geno... 54 3e-06
UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein; ... 54 3e-06
UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica ... 54 3e-06
UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n... 53 6e-06
UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 53 8e-06
UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histon... 53 8e-06
UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2... 52 1e-05
UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;... 52 2e-05
UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep: H... 52 2e-05
UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila melanogast... 49 1e-04
UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole... 48 2e-04
UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep: His... 48 2e-04
UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone H2... 46 7e-04
UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; ... 45 0.002
UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep: Pred... 45 0.002
UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellu... 44 0.004
UniRef50_Q54BC2 Cluster: Histone H2A; n=1; Dictyostelium discoid... 44 0.005
UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Hist... 43 0.006
UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole geno... 42 0.019
UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;... 39 0.10
UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n... 39 0.13
UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whol... 39 0.13
UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whol... 39 0.13
UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.18
UniRef50_A5E3I3 Cluster: DNA polymerase epsilon subunit C; n=6; ... 38 0.24
UniRef50_Q5DF37 Cluster: SJCHGC07091 protein; n=1; Schistosoma j... 37 0.41
UniRef50_A7QA25 Cluster: Chromosome undetermined scaffold_69, wh... 37 0.54
UniRef50_A2QBU3 Cluster: Function: negative co-factor 2; n=2; Eu... 37 0.54
UniRef50_Q4REE9 Cluster: Chromosome 10 SCAF15123, whole genome s... 36 1.3
UniRef50_A2FNS8 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_Q975M8 Cluster: Putative uncharacterized protein ST0391... 35 1.7
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 35 2.2
UniRef50_P26675 Cluster: Protein son of sevenless; n=6; Endopter... 35 2.2
UniRef50_A4R921 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q653P3 Cluster: Putative uncharacterized protein P0431E... 33 6.7
UniRef50_Q0DD67 Cluster: Os06g0250300 protein; n=1; Oryza sativa... 33 6.7
UniRef50_Q23TV5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A7MZL4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q6C6M5 Cluster: DNA polymerase epsilon subunit C; n=2; ... 33 8.8
>UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep:
Histone H2AV - Homo sapiens (Human)
Length = 128
Score = 148 bits (359), Expect = 1e-34
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHLK RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP
Sbjct: 25 GLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 84
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIRGDEEL
Sbjct: 85 RHLQLAIRGDEEL 97
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLIGKKG 332
+DSLIKATIAGGGVIPHIHKSLIGKKG
Sbjct: 97 LDSLIKATIAGGGVIPHIHKSLIGKKG 123
>UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histone
H2A - Paramecium tetraurelia
Length = 183
Score = 127 bits (306), Expect = 3e-28
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR+LK R ++ RVG T+AVY++AILEYLTAEVLELAGNASKD KV+RITP
Sbjct: 77 GLQFPVGRIHRYLKQRVSAKNRVGTTSAVYTSAILEYLTAEVLELAGNASKDFKVRRITP 136
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIRGDEEL
Sbjct: 137 RHLQLAIRGDEEL 149
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLIGKK 329
+D LI+ATIAGGGVIPHIHK+L GK+
Sbjct: 149 LDILIRATIAGGGVIPHIHKALFGKQ 174
>UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Histone
H2A.Z - Schizosaccharomyces pombe (Fission yeast)
Length = 171
Score = 124 bits (298), Expect = 3e-27
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+ R LK +T ++ RVGA +AVYSAA+LEYLTAEVLELAGNA+KDLKVKRITP
Sbjct: 63 GLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRITP 122
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIRGDEEL
Sbjct: 123 RHLQLAIRGDEEL 135
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/23 (69%), Positives = 22/23 (95%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLI 320
+D+LI+ATIAGGGV+PHI+K L+
Sbjct: 135 LDTLIRATIAGGGVLPHINKQLL 157
>UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep:
Histone H2A.Z - Saccharomyces cerevisiae (Baker's yeast)
Length = 134
Score = 119 bits (287), Expect = 6e-26
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRI R+LK T RVG+ AA+Y A+LEYLTAEVLELAGNA+KDLKVKRITP
Sbjct: 30 GLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITP 89
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIRGD+EL
Sbjct: 90 RHLQLAIRGDDEL 102
Score = 40.3 bits (90), Expect = 0.044
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLIGK 326
+DSLI+ATIA GGV+PHI+K+L+ K
Sbjct: 102 LDSLIRATIASGGVLPHINKALLLK 126
>UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268;
Eukaryota|Rep: Histone H2A type 2-A - Homo sapiens
(Human)
Length = 130
Score = 101 bits (243), Expect = 1e-20
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI P
Sbjct: 23 GLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIP 81
Query: 217 RHLQLAIRGDEELTAS*KQLSLAE 288
RHLQLAIR DEEL ++++A+
Sbjct: 82 RHLQLAIRNDEELNKLLGKVTIAQ 105
>UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histone
H2A - Acropora formosa (Staghorn coral)
Length = 125
Score = 99 bits (238), Expect = 5e-20
Identities = 50/73 (68%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRLLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep:
Histone H2A.x - Homo sapiens (Human)
Length = 143
Score = 99 bits (238), Expect = 5e-20
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI P
Sbjct: 23 GLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIP 81
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIR DEEL
Sbjct: 82 RHLQLAIRNDEEL 94
>UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep:
Histone H2A - Drosophila melanogaster (Fruit fly)
Length = 124
Score = 99.1 bits (236), Expect = 9e-20
Identities = 52/84 (61%), Positives = 62/84 (73%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR L+ + RVGA A VY AA++EYL AEVLELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEELTAS*KQLSLAE 288
RHLQLAIR DEEL +++A+
Sbjct: 81 RHLQLAIRNDEELNKLLSGVTIAQ 104
>UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7;
Trypanosomatidae|Rep: Histone H2A, putative - Leishmania
major
Length = 177
Score = 93.1 bits (221), Expect = 6e-18
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L FPVGRIH LK+ R GA+AA+Y AA+LEYLT EV+EL+G A+K K +RI PR
Sbjct: 72 LNFPVGRIHSRLKDGLYRKQRCGASAAIYCAALLEYLTTEVIELSGAAAKAQKTERIKPR 131
Query: 220 HLQLAIRGDEEL 255
HL LAIRGDEEL
Sbjct: 132 HLLLAIRGDEEL 143
Score = 33.1 bits (72), Expect = 6.7
Identities = 11/22 (50%), Positives = 20/22 (90%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSL 317
++ ++KATI+ GGV+P++HK+L
Sbjct: 143 LNQVVKATISRGGVVPNVHKAL 164
>UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB30ED UniRef100
entry - Canis familiaris
Length = 243
Score = 89.4 bits (212), Expect = 7e-17
Identities = 46/87 (52%), Positives = 63/87 (72%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
G+ FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA++D K R+TP
Sbjct: 20 GVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTP 78
Query: 217 RHLQLAIRGDEELTAS*KQLSLAEASS 297
RH+ LA+ DEEL KQ +++A+S
Sbjct: 79 RHILLAVANDEELNQK-KQGEVSKAAS 104
>UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179;
Eukaryota|Rep: Core histone macro-H2A.1 - Homo sapiens
(Human)
Length = 372
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
G+ FPVGR+ R++K + R+G A VY AA+LEYLTAE+LELAGNA++D K R+TP
Sbjct: 20 GVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTP 78
Query: 217 RHLQLAIRGDEELTAS*KQLSLA 285
RH+ LA+ DEEL K +++A
Sbjct: 79 RHILLAVANDEELNQLLKGVTIA 101
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 252 IDSLIKA-TIAGGGVIPHIHKSLIGKKGG 335
++ L+K TIA GGV+P+IH L+ KK G
Sbjct: 91 LNQLLKGVTIASGGVLPNIHPELLAKKRG 119
>UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74;
Eukaryota|Rep: Core histone macro-H2A.2 - Homo sapiens
(Human)
Length = 372
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
G+ FPVGR+ R+LK T + R+ A VY AA++EYL AE+LELAGNA++D K RI P
Sbjct: 20 GVIFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILELAGNAARDNKKARIAP 78
Query: 217 RHLQLAIRGDEELTAS*KQLSLA 285
RH+ LA+ DEEL K +++A
Sbjct: 79 RHILLAVANDEELNQLLKGVTIA 101
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 252 IDSLIKA-TIAGGGVIPHIHKSLIGKKGG 335
++ L+K TIA GGV+P IH L+ KK G
Sbjct: 91 LNQLLKGVTIASGGVLPRIHPELLAKKRG 119
>UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis
elegans|Rep: Histone H2A - Caenorhabditis elegans
Length = 145
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K R+TP
Sbjct: 35 GLTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTP 94
Query: 217 RHLQLAIRGDEE 252
RHL LAI GD+E
Sbjct: 95 RHLHLAIYGDQE 106
>UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: histone H2A - Entamoeba
histolytica HM-1:IMSS
Length = 159
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKN-RTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 213
GLQFPV RIH LK R H + A+VY A++EYL AEVLELAG +KD RIT
Sbjct: 52 GLQFPVARIHAALKKGRYGEH--INKMASVYLTAVIEYLVAEVLELAGGQAKDFHKTRIT 109
Query: 214 PRHLQLAIRGDEELTAS*KQLSLA 285
PRH+QLA+R D EL K ++++
Sbjct: 110 PRHIQLAVRSDLELNDLLKDVTIS 133
>UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1333, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 195
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/73 (60%), Positives = 51/73 (69%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPV RI R+LK S RVG A+VY A +LEYL EVLELA NA+ D + RI P
Sbjct: 77 GLQFPVSRIDRYLKKGCYSQ-RVGTGASVYLATVLEYLATEVLELARNAAWDNQKHRIIP 135
Query: 217 RHLQLAIRGDEEL 255
RH+ LA+R DEEL
Sbjct: 136 RHVLLAVRNDEEL 148
>UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma
japonicum|Rep: Histone H2A - Schistosoma japonicum
(Blood fluke)
Length = 156
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL V R+HR++K + R A+VY +A++EYL AEV EL+GNA+K K K ITP
Sbjct: 23 GLVISVSRVHRYMKKGRYAR-RTSIAASVYMSAVIEYLVAEVNELSGNAAKANKRKTITP 81
Query: 217 RHLQLAIRGDEELTAS*KQLSLAEASSHTYTNLS-LERKAVLVH 345
RH+ L +R D EL K + ++ + + L+RK VL +
Sbjct: 82 RHIMLGVRNDAELNELLKHVHISHGGVLPCIHPALLKRKGVLTN 125
>UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family protein;
n=2; Tetrahymena thermophila|Rep: Core histone
H2A/H2B/H3/H4 family protein - Tetrahymena thermophila
SB210
Length = 388
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/95 (44%), Positives = 56/95 (58%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FP GR+ R+LK + RV ++ +Y A +LEYL AEVLE AGN +K+ ++ RI P
Sbjct: 288 GLVFPCGRLRRYLK-QACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAKNNRLSRINP 346
Query: 217 RHLQLAIRGDEELTAS*KQLSLAEASSHTYTNLSL 321
H++ A R D EL +AE S T TN L
Sbjct: 347 VHIREAFRNDAELNQFVNGTIIAEGGS-TSTNFVL 380
>UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 143
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA----SKDL-KV 201
GL FPVGRIHR LKN+ RV ++VY AAILEYL +EVLEL + SK+ V
Sbjct: 25 GLIFPVGRIHRMLKNKVPLK-RVSILSSVYLAAILEYLASEVLELTISQVSIQSKEYHNV 83
Query: 202 KRITPRHLQLAIRGDEEL 255
+RI+PRHL LAI+ DEEL
Sbjct: 84 RRISPRHLLLAIKTDEEL 101
>UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep:
Histone H2A - Trypanosoma cruzi
Length = 135
Score = 72.9 bits (171), Expect = 7e-12
Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD--LKVKRI 210
GL FPVGR+ L+ + R+GA+ AVY AA+LEYLTAE+LEL+ A+ K KR+
Sbjct: 24 GLIFPVGRVGSLLRRGQYAR-RIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRL 82
Query: 211 TPRHLQLAIRGDEELTAS*KQLSLAEASSHTYTNLSLERK 330
TPR + LA+R D++L K ++L+ N +L +K
Sbjct: 83 TPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122
>UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 219
Score = 72.5 bits (170), Expect = 9e-12
Identities = 45/80 (56%), Positives = 51/80 (63%)
Frame = -1
Query: 254 NSSSPLIASCKCRGVIRFTFKSLDAFPANSKTSAVRYSKIAAE*TAAVAPTRPWLVVLFL 75
NSSS LIA+ C G I SL A PANS+TSA +YSK AA+ T A P L + F
Sbjct: 22 NSSSFLIANKICLGTILVFLLSLAALPANSRTSAAKYSKTAAKQTGAPVPILS-LYLPFF 80
Query: 74 RCL*ILPTGN*SPALADLET 15
+ L ILPTGN PALADLET
Sbjct: 81 KNLEILPTGNQRPALADLET 100
>UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC564406 protein -
Strongylocentrotus purpuratus
Length = 338
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 157 EVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
+VLELAGNASKDLKVKRITPRHLQLAIRGDEEL
Sbjct: 275 QVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 307
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLIGKKGGPGA 344
+DSLIKATIAGGGVIPHIHKSLIGKKG A
Sbjct: 307 LDSLIKATIAGGGVIPHIHKSLIGKKGSQKA 337
>UniRef50_Q00Y54 Cluster: Histone H2A; n=1; Ostreococcus tauri|Rep:
Histone H2A - Ostreococcus tauri
Length = 152
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/65 (61%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT- 213
GLQFPVGR+ R+LK + RVGA A VY AA+LEYL AEVLELAGNAS +R T
Sbjct: 40 GLQFPVGRVARYLKQGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNASLGDPQRRGTV 98
Query: 214 --PRH 222
PRH
Sbjct: 99 QAPRH 103
>UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 494
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/73 (53%), Positives = 46/73 (63%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQF + I R+LK S R G +A VY AILEYL EV +LA NA+KD K RI
Sbjct: 418 GLQFLICCIGRYLKKDCHSQ-RFGTSAQVYLTAILEYLAVEVWKLARNAAKDNKKNRIIL 476
Query: 217 RHLQLAIRGDEEL 255
RH+ A+R DEEL
Sbjct: 477 RHVLSAMRNDEEL 489
>UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia
intestinalis|Rep: Histone H2A - Giardia lamblia ATCC
50803
Length = 124
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
G+ FP+GRIHRHL+ + R+ + A VY AA+LE + AEV A N KRI P
Sbjct: 20 GISFPIGRIHRHLREGRYAE-RISSDAPVYLAAVLENVVAEVFREACNHRDKKSQKRIVP 78
Query: 217 RHLQLAIRGDEELTAS*KQLSLAE 288
H+ A+R D+EL +++ E
Sbjct: 79 NHILTALRKDKELATIFANVTIRE 102
>UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 154
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
G+ FPV R+ R L+ + RV +TA VY AA+LEYL E+LELA N K RITP
Sbjct: 42 GITFPVSRVDRLLREGRFAP-RVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRITP 100
Query: 217 RHLQLAIRGDEELTAS*KQLSLA 285
+H+ A+ D EL + + +++A
Sbjct: 101 QHINWAVGNDLELNSLFQHVTIA 123
>UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium
longiflorum|Rep: Histone H2A.2 - Lilium longiflorum
(Trumpet lily)
Length = 128
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/97 (40%), Positives = 55/97 (56%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
LQF V R+ LK R+GATA VY AA+LE L AEVLE+A N ++ K I PR
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIKPR 82
Query: 220 HLQLAIRGDEELTAS*KQLSLAEASSHTYTNLSLERK 330
H+ LA+R D E+ ++++ + T L+R+
Sbjct: 83 HIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRR 119
>UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 158
Score = 60.9 bits (141), Expect = 3e-08
Identities = 45/97 (46%), Positives = 51/97 (52%), Gaps = 23/97 (23%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELA-------------- 174
GLQFPVGRI R LK + RVGA A VY AA+LEYL AEV ++
Sbjct: 24 GLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVAIVSVFLDPFDMRYCRES 82
Query: 175 ---------GNASKDLKVKRITPRHLQLAIRGDEELT 258
G D K RI PRH+QLA+R DEELT
Sbjct: 83 VGIGCWSSPGTRRGDNKKTRIVPRHIQLAVRNDEELT 119
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 270 ATIAGGGVIPHIHKSLIGKKGG 335
ATIA GGV+P+IH+ L+ KK G
Sbjct: 125 ATIASGGVMPNIHQHLLPKKAG 146
>UniRef50_Q9XG56 Cluster: Histone H2A.1; n=1; Lilium
longiflorum|Rep: Histone H2A.1 - Lilium longiflorum
(Trumpet lily)
Length = 110
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/72 (47%), Positives = 44/72 (61%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
LQF V R+ LK R+GATA VY AA+LE L AEVL++A N +++ I PR
Sbjct: 24 LQFSVSRVEYSLKKGRYCR-RLGATAPVYLAAVLENLVAEVLDMAANVTEETSPIVIKPR 82
Query: 220 HLQLAIRGDEEL 255
H+ LA R D E+
Sbjct: 83 HIMLAPRNDVEV 94
>UniRef50_UPI0001554FEE Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 146
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L+F V + R L+ S RV V+ AA+LEYLTAE+LELAG+ + + +RI P
Sbjct: 30 LRFSVSLVDRFLRRGRYSR-RVAEGTPVFLAAVLEYLTAELLELAGHTAGAHRRQRIAPV 88
Query: 220 HLQLAIRGDEEL 255
HL+ A+R D EL
Sbjct: 89 HLRQAVRDDPEL 100
>UniRef50_UPI0000ECC705 Cluster: UPI0000ECC705 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC705 UniRef100 entry -
Gallus gallus
Length = 131
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FPV RI R L+ + R GA A VY AA+L+++T + +++AG SK + I+P
Sbjct: 24 GLLFPVSRIERQLRRGQFAE-RFGANAPVYLAAVLQWVTHKTMDMAGKISKKSNQQYISP 82
Query: 217 RHLQLAIRGDEEL 255
HLQ++I+ L
Sbjct: 83 CHLQMSIKNSPVL 95
>UniRef50_UPI000050472B Cluster: RIKEN cDNA 4930557A04 gene; n=1;
Rattus norvegicus|Rep: RIKEN cDNA 4930557A04 gene -
Rattus norvegicus
Length = 122
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L FPV ++ R L+ R TS ++A V+ A +LEYLT+ +L+LAG + + K I+P
Sbjct: 17 LHFPVNKVERLLRERNTSKCP-NSSAPVFLAGVLEYLTSNILDLAGKEAHNSGSKLISPE 75
Query: 220 HLQLAIRGDE 249
H+ +AIR +E
Sbjct: 76 HVTMAIRKNE 85
>UniRef50_P98176 Cluster: Histone H2A-Bbd; n=10; Eutheria|Rep:
Histone H2A-Bbd - Homo sapiens (Human)
Length = 115
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L F V ++ R L+ + R+ TA VY AA++EYLTA+VLELAGN +++ + ITP
Sbjct: 28 LSFSVSQVERSLREGHYAQ-RLSRTAPVYLAAVIEYLTAKVLELAGNEAQNSGERNITPL 86
Query: 220 HLQLAIRGDEELT 258
L + + D L+
Sbjct: 87 LLDMVVHNDRLLS 99
>UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 260
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L FPV RI + ++ + R + A V+ AA+LEYLT E+LEL+ + RITP+
Sbjct: 139 LTFPVSRIEKMIREGRFTK-RCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQ 197
Query: 220 HLQLAIRGDEELTAS*KQLSLA 285
H+ L+I D EL K +++A
Sbjct: 198 HIHLSICCDAELNDLLKNVTIA 219
>UniRef50_A6NLZ7 Cluster: Histone H2A; n=3; Homo/Pan/Gorilla
group|Rep: Histone H2A - Homo sapiens (Human)
Length = 116
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGR-VGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
LQFPV + R L R + H R + +T V+ A +LEYLTA +LE G K+ ITP
Sbjct: 23 LQFPVSHLERCL--RESQHARHLSSTTPVFLAGVLEYLTANILEKVGKEVKNSCRLCITP 80
Query: 217 RHLQLAIRGDEEL 255
H++ A++ DE+L
Sbjct: 81 EHVKRALQKDEQL 93
>UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 404
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/73 (49%), Positives = 41/73 (56%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQF V RI R+LK S RVG A VY VLELA NA++D K RI P
Sbjct: 55 GLQFSVDRIGRYLKKGHHSQ-RVGTDAQVYLVT--------VLELARNAARDNKKNRIIP 105
Query: 217 RHLQLAIRGDEEL 255
RH+ +R DEEL
Sbjct: 106 RHVLSVVRNDEEL 118
>UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 286
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN-ASKDLKVKRIT 213
GL V R+ + L+ R S RV T+ V+ AA+LEY+ E+LEL+ N S K +RI
Sbjct: 185 GLTISVSRVEKLLRGRRYSK-RVSPTSCVFLAAVLEYMVLELLELSLNELSLSKKSRRIK 243
Query: 214 PRHLQLAIRGDEELTA 261
RH+ L+I D EL+A
Sbjct: 244 NRHINLSILKDVELSA 259
>UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
indica (Rice)
Length = 180
Score = 54.0 bits (124), Expect = 3e-06
Identities = 40/91 (43%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAA------------------ILEYLTAEV 162
GLQFPVG I R+LK + RVG A +Y AA + L +V
Sbjct: 20 GLQFPVGHIGRYLKKGRYTQ-RVGIGAPIYLAAEASPIVYLFLYQSFQPSMVNRDLLMKV 78
Query: 163 LELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
LELAGN + D K RI PRH+ LAIR D+EL
Sbjct: 79 LELAGNMAWDNKKNRIIPRHVLLAIRNDDEL 109
>UniRef50_UPI0000EB494E Cluster: UPI0000EB494E related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB494E UniRef100
entry - Canis familiaris
Length = 103
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
LQFP+ R+ R L+ +H + + V+ A+ILEYLTA +LELAG + + RI P+
Sbjct: 25 LQFPISRVDRLLREGHYAHC-LSLSMPVFLASILEYLTANILELAGQEAHNSHKMRI-PQ 82
Query: 220 HLQLAIRGDEELT 258
H+Q A+ ++ L+
Sbjct: 83 HMQKALGNNQHLS 95
>UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 115
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 157 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELT 258
+VLELAGNA++D K RI PRH+QLA+R DEEL+
Sbjct: 42 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS 75
Score = 35.9 bits (79), Expect = 0.95
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3
Query: 273 TIAGGGVIPHIHKSLIGKKGG 335
TIA GGV+P+IH++L+ KKGG
Sbjct: 82 TIAAGGVLPNIHQTLLPKKGG 102
>UniRef50_A2YA27 Cluster: Histone H2A; n=2; Eukaryota|Rep: Histone
H2A - Oryza sativa subsp. indica (Rice)
Length = 88
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLE 168
G QFPVGRI R+LK + RVG+ A VY AA+LEYL AEVLE
Sbjct: 33 GFQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLE 75
>UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2A
type 1; n=2; Euarchontoglires|Rep: PREDICTED: similar to
Histone H2A type 1 - Rattus norvegicus
Length = 177
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 160 VLELAGNASKDLKVKRITPRHLQLAIRGDEELTAS*KQLSLAE 288
+LELAGNA++D K RI PRHLQLAIR DEEL ++++A+
Sbjct: 68 ILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQ 110
>UniRef50_UPI0000E494D2 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 96
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 213
LQF VG +H ++ + RVG A VY AA+LEYLTAE+LEL A D K RI+
Sbjct: 9 LQFSVGPVHWFVRKGNYAQ-RVGGGAPVYMAAVLEYLTAEILELTDIAVHDNKKSRIS 65
>UniRef50_Q32P61 Cluster: Histone H2A; n=6; Laurasiatheria|Rep:
Histone H2A - Bos taurus (Bovine)
Length = 117
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
LQFPV R+ R L+ ++ R+ + V+ ILEYL A +L+LAG + RI+P
Sbjct: 26 LQFPVSRVDRLLREGQFAN-RLSSATPVFLTGILEYLIANILDLAGKEACTNHRVRISPE 84
Query: 220 HLQLAIRGDEEL 255
H+Q A+ +E L
Sbjct: 85 HVQTALVNNENL 96
>UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila
melanogaster|Rep: Histone H2A - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/69 (47%), Positives = 37/69 (53%)
Frame = +1
Query: 49 PVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQ 228
PVGRIHR L + G + I EVLELAGNA++D RI PRHL
Sbjct: 102 PVGRIHRLLWKGNYACGCRRPSLPSCRNGISG---PEVLELAGNAARDNNKTRIIPRHLH 158
Query: 229 LAIRGDEEL 255
LAIR D EL
Sbjct: 159 LAIRNDTEL 167
>UniRef50_Q4T4T2 Cluster: Chromosome undetermined SCAF9554, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9554,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 329
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1
Query: 154 AEVLELAGNASKDLKVKRITPRHLQLAIRGDEE 252
AE+LE+AGNA++D +RITPRH++LA+ D+E
Sbjct: 1 AEILEMAGNAARDKNKRRITPRHMKLAVANDDE 33
>UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep:
Histone H2A - Oryza sativa subsp. indica (Rice)
Length = 276
Score = 48.0 bits (109), Expect = 2e-04
Identities = 42/97 (43%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-------------------- 159
LQFPVGR +LK + RVG A VY AA+LEYL AE
Sbjct: 30 LQFPVGR---YLKKGHYAQ-RVGIGAPVYLAAVLEYLAAEASPIVYLFLYQSFQPSVVNR 85
Query: 160 -----VLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
VLELA N ++D K RI PRH+ LAI D+EL
Sbjct: 86 DLLMQVLELARNVARDNKKNRIIPRHVLLAICNDDEL 122
>UniRef50_UPI00005A604D Cluster: PREDICTED: similar to Histone
H2A-Bbd (H2A Barr body-deficient); n=2; Canis lupus
familiaris|Rep: PREDICTED: similar to Histone H2A-Bbd
(H2A Barr body-deficient) - Canis familiaris
Length = 163
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/90 (30%), Positives = 51/90 (56%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL F V ++ R L+ + R+GA+A ++ AA++++LTA VL LAG+ ++ + ITP
Sbjct: 75 GLAFSVCQMERLLRAGRYAK-RLGASAPIFLAAVIQFLTATVLGLAGDEARHRRTAYITP 133
Query: 217 RHLQLAIRGDEELTAS*KQLSLAEASSHTY 306
+ A+ E L+ ++++ + Y
Sbjct: 134 ELVDRALHNHELLSGLFTMTTVSQVAPARY 163
>UniRef50_UPI0000565024 Cluster: H2A histone family member; n=3; Mus
musculus|Rep: H2A histone family member - Mus musculus
Length = 115
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN-ASKDLKVKRITP 216
L F V + +HL+ + + R+ ++ AAILE LT +LELAGN A + +RITP
Sbjct: 27 LIFAVSLVEQHLREISRAW-RLSDMVPIFLAAILESLTRRLLELAGNEAQRRGTERRITP 85
Query: 217 RHLQLAIRGDEELT 258
L LA+ + EL+
Sbjct: 86 ELLDLAVYSNMELS 99
>UniRef50_Q497L1 Cluster: Predicted; n=10; Mus musculus|Rep:
Predicted - Mus musculus (Mouse)
Length = 109
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +1
Query: 43 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRH 222
+ P+ + R L+ S R+ ++A + ++LEYLT+ +LELAG + K + P
Sbjct: 20 ELPLSLVDRFLREEIHS-SRLSSSALPFLTSVLEYLTSNILELAGEVAHTTGRKCVAPED 78
Query: 223 LQLAIRGDEEL 255
+ L ++ +E+L
Sbjct: 79 VHLVVQNNEQL 89
>UniRef50_Q07889 Cluster: Son of sevenless homolog 1; n=70; cellular
organisms|Rep: Son of sevenless homolog 1 - Homo sapiens
(Human)
Length = 1333
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L PV +IH LK ++ +VY A+LEY++A++L+L GN ++++ IT +
Sbjct: 103 LSLPVEKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEITKQ 160
Query: 220 HLQLAIRGDEEL 255
+++A+ D+ L
Sbjct: 161 DIKVAMCADKVL 172
>UniRef50_Q54BC2 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 226
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 HRHLKNRTTSHG---RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLA 234
H +LK + R+ ++ Y +A++EYL +E+LEL+ N + K I PR + LA
Sbjct: 137 HSYLKTKVKQMNYNYRISNSSMHYLSAVIEYLLSEILELSSNGAVSAKRTLIQPRDIFLA 196
Query: 235 IRGDEEL 255
I D EL
Sbjct: 197 IANDIEL 203
>UniRef50_A2RRV5 Cluster: Histone H2A; n=2; Danio rerio|Rep: Histone
H2A - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 713
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 219
L PV +IH LK ++ +VY A+LEY++A++L+LAGN ++++ I+ +
Sbjct: 103 LALPVDKIHPLLKE--VLGYKIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEISQQ 160
Query: 220 HLQLAIRGDEEL 255
+ +A+ D+ L
Sbjct: 161 DITVAMCADKVL 172
>UniRef50_A7PU16 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 157
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 198
LQF VG+I LK+ + A VY +A LEYL EVLEL+GN ++ ++
Sbjct: 26 LQFIVGQIAHFLKSLQVIWS-CSSNAPVYVSAFLEYLAVEVLELSGNVARAIR 77
>UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;
Eumetazoa|Rep: Histone H2A [Contains: Hipposin] -
Hippoglossus hippoglossus (Atlantic halibut)
Length = 52
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVY 126
GLQFPVGR+HR L+ +H RVGA A VY
Sbjct: 23 GLQFPVGRVHRLLRKGNYAH-RVGAGAPVY 51
>UniRef50_UPI0001553928 Cluster: PREDICTED: similar to H2A-Bbd; n=2;
Mus musculus|Rep: PREDICTED: similar to H2A-Bbd - Mus
musculus
Length = 172
Score = 38.7 bits (86), Expect = 0.13
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 40 LQFPVGRIHRHLKNRTTSHG-RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK-RIT 213
L F V + + L R SH R+ ++ AAILE+LT +LELAGN ++ + IT
Sbjct: 23 LIFTVSLVEQSL--RDLSHAWRLSDMVPIFLAAILEFLTYRLLELAGNETQQRGTQMSIT 80
Query: 214 PRHLQLAIRGDEELT 258
P L L + + +L+
Sbjct: 81 PELLDLEVYSNMQLS 95
>UniRef50_Q4T188 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10698, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1407
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/52 (30%), Positives = 35/52 (67%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
++ ++Y A+LEY++A++L+LAGN K+++ I+ + + +A+ D+ L
Sbjct: 146 KIDHQVSLYMVAVLEYISADILKLAGNYVKNIRHCEISQQDITVAMCADKVL 197
>UniRef50_Q4S295 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1379
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/52 (30%), Positives = 35/52 (67%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
++ ++Y A+LEY++A++L+LAGN K+++ I+ + + +A+ D+ L
Sbjct: 199 KIDHQVSLYMVAVLEYISADILKLAGNYVKNIRHCEISQQDITVAMCADKVL 250
>UniRef50_A7SPX8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 885
Score = 38.3 bits (85), Expect = 0.18
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FPVGRI R L + + RV AA+Y AA LEY+ E + A + + + P
Sbjct: 113 GLVFPVGRIFRWLLDMKVAC-RVYDAAAIYLAATLEYIAEETIYRAVTTRE--VIDHVVP 169
Query: 217 RHLQLAIRGDEEL 255
++ + D +L
Sbjct: 170 ETVEKCVNMDPDL 182
>UniRef50_A5E3I3 Cluster: DNA polymerase epsilon subunit C; n=6;
Saccharomycetales|Rep: DNA polymerase epsilon subunit C
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 251
Score = 37.9 bits (84), Expect = 0.24
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 46 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 225
FP RI + +++ G+V V LE A ++E++ + +K VKRIT H+
Sbjct: 168 FPAARIKKIMQS-DEEIGKVAQATPVVVGRALEIFMANLVEVSVSQAKKQGVKRITASHV 226
Query: 226 QLAIRGDEE 252
+LAI E+
Sbjct: 227 KLAIENTEQ 235
>UniRef50_Q5DF37 Cluster: SJCHGC07091 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07091 protein - Schistosoma
japonicum (Blood fluke)
Length = 244
Score = 37.1 bits (82), Expect = 0.41
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = -3
Query: 642 MHIPTSYIQNFKCPM--NKQKLSLILIQSYFKSP--YSLHISITYSYILVRTNSSSHTTV 475
+H+P +YI N + N Q++ + S+ SP + L+ SI YS + + T+SSS TT+
Sbjct: 65 IHMPINYIGNGNQHLLHNLQQIITLAFMSFNNSPLHHVLNDSIKYSTLDLFTSSSSSTTI 124
Query: 474 HFTN 463
H +N
Sbjct: 125 HTSN 128
>UniRef50_A7QA25 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 97
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -1
Query: 248 SSPLIASCKCRGVIRFTFKSLDAFPANSKTSA 153
SS LIA C G+I F SL AFPAN KTSA
Sbjct: 31 SSFLIADKTCLGIILFFLLSLAAFPANYKTSA 62
>UniRef50_A2QBU3 Cluster: Function: negative co-factor 2; n=2;
Eurotiomycetidae|Rep: Function: negative co-factor 2 -
Aspergillus niger
Length = 295
Score = 36.7 bits (81), Expect = 0.54
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +1
Query: 43 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRH 222
+FPV RI R + G+V + + LE ++ A +KD KR+T H
Sbjct: 181 KFPVARIKR-IMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAREAKDRNSKRVTASH 239
Query: 223 LQLAIRGDEEL 255
L+ A+ DE L
Sbjct: 240 LKQAVVKDEVL 250
>UniRef50_Q4REE9 Cluster: Chromosome 10 SCAF15123, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF15123, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1448
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/52 (28%), Positives = 35/52 (67%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
+V ++Y A+LEY++A++L+LAGN +++ I+ + +++++ D+ L
Sbjct: 154 KVDYHVSLYIVAVLEYISADILKLAGNYVGNIRHYEISQQDIKVSMCADKVL 205
>UniRef50_A2FNS8 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 523
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = -1
Query: 383 SIILSSHNLKLNGCTRTAFLSNERFVYVWDDASASDSCFYEAVNSSSPLI 234
+ +++ +NLK++ + + + E F V+D + +D CFY ++N + PL+
Sbjct: 310 TFLMNEYNLKIDLESCVKYKNLESFFVVFDQTNDADICFYYSINFNVPLL 359
>UniRef50_Q975M8 Cluster: Putative uncharacterized protein ST0391;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST0391 - Sulfolobus tokodaii
Length = 186
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = -3
Query: 603 PMNKQKLSLILIQSYFKSPYSLHIS--ITYS-YILVRTNSSSHTTVHFTN 463
P +L++ +IQ+Y K+P ++IS +TYS YI V ++SS + F+N
Sbjct: 39 PSTNCELNIYIIQTYQKTPLEINISFNLTYSPYIYVYIHNSSFLNISFSN 88
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 184 SKDLKVKRITPRHLQLAIRGDEEL 255
+++ K RI PRHLQLA+R DEEL
Sbjct: 62 ARNNKKTRIIPRHLQLAVRNDEEL 85
>UniRef50_P26675 Cluster: Protein son of sevenless; n=6;
Endopterygota|Rep: Protein son of sevenless - Drosophila
melanogaster (Fruit fly)
Length = 1596
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/69 (21%), Positives = 38/69 (55%)
Frame = +1
Query: 49 PVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQ 228
P ++H L+ + ++ ++ + + A+LEY++A++L++AG+ + IT ++
Sbjct: 155 PTEKVHTLLQKDVLQY-KIDSSVSAFLVAVLEYISADILKMAGDYVIKIAHCEITKEDIE 213
Query: 229 LAIRGDEEL 255
+ + D L
Sbjct: 214 VVMNADRVL 222
>UniRef50_A4R921 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 281
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 43 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRH 222
+FP RI R + G+V + LE ++ + + +KD KR+T +H
Sbjct: 162 RFPTARIKR-IMQADEEVGKVAQQTPIAVGKALEMFMVALVSKSHDVAKDKGAKRVTAQH 220
Query: 223 LQLAIRGDEE 252
L+ I D++
Sbjct: 221 LKQVIESDDQ 230
>UniRef50_Q653P3 Cluster: Putative uncharacterized protein
P0431E05.8; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431E05.8 - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNR 84
GLQFPVGRI R+LKNR
Sbjct: 33 GLQFPVGRIGRYLKNR 48
>UniRef50_Q0DD67 Cluster: Os06g0250300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0250300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNR 84
GLQFPVGRI R+LKNR
Sbjct: 33 GLQFPVGRIGRYLKNR 48
>UniRef50_Q23TV5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 392
Score = 33.1 bits (72), Expect = 6.7
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = -3
Query: 654 NDTAMHIPTSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISITY---SYILVRTNSSSH 484
N+ P+SY QNF+ + ++ L I I + +S + I Y + LVR N +
Sbjct: 185 NECFQSCPSSYYQNFQTQICEKMLQCIQIDNSLRSLDDRVLQIEYISNNQYLVRANQCNF 244
Query: 483 TTV----HFTNIILIENYVNQSGR*FVQVCYDGRYQMQYNFVI 367
V + N+ +++N + G Q +G+ Q Q +F+I
Sbjct: 245 ALVNQDWNIINLQILQNMQDYKG----QYMINGQEQFQKSFII 283
>UniRef50_A7MZL4 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 633
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 160 VLELAGNASKDLKVKRITPRHLQLAIRGDEELTAS*KQLSLA 285
+++ A + S D KVK+I P H+Q+ G +S K++SLA
Sbjct: 103 IIKAAASVSPDGKVKQINPSHVQVLNTGGYNTFSSHKEVSLA 144
>UniRef50_Q6C6M5 Cluster: DNA polymerase epsilon subunit C; n=2;
Ascomycota|Rep: DNA polymerase epsilon subunit C -
Yarrowia lipolytica (Candida lipolytica)
Length = 114
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 43 QFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRH 222
+FPV RI + L G+V A LE ++E N ++ KR++P H
Sbjct: 11 RFPVARIKK-LMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRVSPSH 69
Query: 223 LQLAIRGDEE 252
L+ A+ E+
Sbjct: 70 LKQAVLETEQ 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,014,880
Number of Sequences: 1657284
Number of extensions: 13300113
Number of successful extensions: 30761
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 29630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30738
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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