Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0154
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 271 QLSLAEASSHTYTNLSLERKAVLVHPFNF 357
           Q  +  +S++    LS++R   + HP NF
Sbjct: 126 QAVVTYSSTYVLVALSIDRYDAITHPMNF 154


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query: 483 CD--WNCWSGLICSYK 524
           CD  WNCW+G    Y+
Sbjct: 108 CDVFWNCWNGEASRYQ 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query: 483 CD--WNCWSGLICSYK 524
           CD  WNCW+G    Y+
Sbjct: 108 CDVFWNCWNGEASRYQ 123


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 296 DDASASDSCFYEAVNSSSPLIASCKCRGVIRFTFKSL 186
           D+A+A + C     +    L     CR V+R T   L
Sbjct: 26  DEATADELCENRPADEYFRLTTEGDCRDVVRCTKSGL 62


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 594 KQKLSLILIQSYFKSPYSLHISITYSYILVR 502
           K+   LIL   +F + YSL I I Y   +V+
Sbjct: 137 KRARYLILAAWFFSALYSLPILIFYEEKIVK 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,360
Number of Sequences: 336
Number of extensions: 3395
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)