Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0154
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0) 104 6e-23
SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33) 103 1e-22
SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33) 103 1e-22
SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33) 103 1e-22
SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33) 103 1e-22
SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33) 103 1e-22
SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32) 101 6e-22
SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31) 101 6e-22
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 99 2e-21
SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33) 99 2e-21
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33) 100 2e-21
SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33) 100 2e-21
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31) 97 1e-20
SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12) 80 2e-15
SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12) 75 6e-14
SB_31723| Best HMM Match : Histone (HMM E-Value=0.016) 68 8e-12
SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016) 64 8e-11
SB_7769| Best HMM Match : Histone (HMM E-Value=0.2) 63 2e-10
SB_30055| Best HMM Match : Histone (HMM E-Value=0.97) 46 2e-05
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42) 29 2.7
SB_39243| Best HMM Match : HTH_7 (HMM E-Value=0.035) 29 2.7
SB_35253| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 28 6.3
SB_31174| Best HMM Match : LIM_bind (HMM E-Value=0) 28 6.3
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 28 6.3
SB_16639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_27184| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-05) 28 8.3
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 28 8.3
SB_22486| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 151 bits (365), Expect = 7e-37
Identities = 73/73 (100%), Positives = 73/73 (100%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP
Sbjct: 95 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 154
Query: 217 RHLQLAIRGDEEL 255
RHLQLAIRGDEEL
Sbjct: 155 RHLQLAIRGDEEL 167
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 252 IDSLIKATIAGGGV 293
+DSLIKATIAGGGV
Sbjct: 167 LDSLIKATIAGGGV 180
>SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0)
Length = 863
Score = 104 bits (250), Expect = 6e-23
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 759 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 817
Query: 217 RHLQLAIRGDEELTAS*KQLSLAE 288
RHLQLA+R DEEL + +++A+
Sbjct: 818 RHLQLAVRNDEELNRLLRGVTIAQ 841
>SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 134
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 30 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 88
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 89 RHLQLAVRNDEEL 101
>SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 392 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 450
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 451 RHLQLAVRNDEEL 463
>SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 103 bits (248), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 270 ATIAGGGVIPHIHKSLIGKK 329
ATIA GGV+P+I SL+ KK
Sbjct: 100 ATIAQGGVLPNIQASLLPKK 119
>SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 126
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 103 bits (247), Expect = 1e-22
Identities = 51/73 (69%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32)
Length = 125
Score = 101 bits (242), Expect = 6e-22
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA+ D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAACDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31)
Length = 125
Score = 101 bits (242), Expect = 6e-22
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHRHL+ + RVGA A V+ AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVHLAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 99 bits (238), Expect = 2e-21
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 99 bits (238), Expect = 2e-21
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 125
Score = 99 bits (238), Expect = 2e-21
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 99 bits (238), Expect = 2e-21
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33)
Length = 125
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRVHRFLRKGNYAK-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33)
Length = 126
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/73 (68%), Positives = 58/73 (79%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR L+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRLLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 98.3 bits (234), Expect = 5e-21
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPV R+HR+L+ + T H R+ A A VY AA++EYLTAE+LELAGNA++D K RI P
Sbjct: 657 GLQFPVSRVHRYLR-KCTHHYRISAAAPVYQAAVMEYLTAEILELAGNAARDNKKTRIIP 715
Query: 217 RHLQLAIRGDEELTAS*KQLSLAEAS--SHTYTNLSLERK-AVLVHPFNFK 360
RH+ LA+ DEEL K +++A + + L +RK LV P K
Sbjct: 716 RHILLAVANDEELHKLLKGVTIASGGVLPNIHPELLKKRKGGKLVSPEELK 766
>SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31)
Length = 126
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR L+ + RVGA VY AA+LEYL+AE+LELAGNA++D K RI P
Sbjct: 22 GLQFPVGRIHRLLRKGNYAE-RVGAGDPVYMAAVLEYLSAEILELAGNAARDNKKTRIIP 80
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 81 RHLQLAVRNDEEL 93
>SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELTAS*KQLS 279
RVGA A VY AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL + ++
Sbjct: 6 RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLQGVT 65
Query: 280 LAE 288
+A+
Sbjct: 66 IAQ 68
>SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12)
Length = 90
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
RVGA A VY AA+LEYL+AE+LELAGNA++D K RI PRHLQLA+R DEEL
Sbjct: 6 RVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEEL 57
>SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12)
Length = 74
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 198
GLQFP+GRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA++D K
Sbjct: 22 GLQFPIGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAARDNK 74
>SB_31723| Best HMM Match : Histone (HMM E-Value=0.016)
Length = 76
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +1
Query: 130 AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
AA+LEYL+AE+LELAGNA++D K RI PRHLQLA+R DEEL
Sbjct: 2 AAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEEL 43
>SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016)
Length = 67
Score = 64.5 bits (150), Expect = 8e-11
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELA 174
GLQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELA
Sbjct: 22 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELA 66
>SB_7769| Best HMM Match : Histone (HMM E-Value=0.2)
Length = 150
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1
Query: 139 LEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 255
LEYL+AE+LELAGNA++D K RI PRHLQLA+R DEEL
Sbjct: 2 LEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEEL 40
>SB_30055| Best HMM Match : Histone (HMM E-Value=0.97)
Length = 129
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAIL 141
GLQFPVGRIHRHL+ + RVGA A VY AA+L
Sbjct: 95 GLQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVL 128
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FPVGRI R L + + RV AA+Y AA LEY+ E + A + + + P
Sbjct: 71 GLVFPVGRIFRWLLDMKVAC-RVYDAAAIYLAATLEYIAEETIYRAVTTRE--VIDHVVP 127
Query: 217 RHLQLAIRGDEEL 255
++ + D +L
Sbjct: 128 ETVEKCVNMDPDL 140
>SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 37 GLQFPVGRIHRHL 75
GLQFPVGRIHRHL
Sbjct: 22 GLQFPVGRIHRHL 34
>SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42)
Length = 366
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 271 QLSLAEASSHTYTNLSLERKAVLVHPFNFKL 363
Q +L S T+T ++LER ++HPF KL
Sbjct: 119 QDALVSVSVFTFTAIALERYRAIIHPFKPKL 149
>SB_39243| Best HMM Match : HTH_7 (HMM E-Value=0.035)
Length = 694
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 553 ISLFSTYFYYL*LHISPDQQFQSHHCPLH*YYF 455
ISLFS+ FY++ LH+ D H LH Y F
Sbjct: 531 ISLFSSLFYFMELHLLLDSDSDIHMYALH-YVF 562
>SB_35253| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 585
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 657 YNDTAMHIPTSYIQNFKCPMNKQKLSLILIQSYFKSPYSLHISITYSYILVRTNSSSHT 481
Y T IP+ N K + + KL+ I SY S LH+ Y + RT S+T
Sbjct: 460 YQVTRTAIPSYTYSNTKLHVQRYKLTRTTIPSYTYSNTKLHVQ---QYQVTRTTMPSYT 515
>SB_31174| Best HMM Match : LIM_bind (HMM E-Value=0)
Length = 609
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -3
Query: 573 LIQSYFKSPYSLHISITYSYILVRTNSSSHTTVHF--TNIILIENYVNQSGR*FVQVCYD 400
LI YF+S + ++ Y ++L S +TT+ N +I +++ + +VC +
Sbjct: 395 LIPRYFRSIFEGGVTELYYHLLQPKESYHNTTITLDCENTTMITSHIKPV---YTKVCTE 451
Query: 399 GRYQMQYNF 373
GR +++ F
Sbjct: 452 GRLILEFTF 460
>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
Length = 722
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -3
Query: 246 ISSNSKL*VPRSNTLHF*IFRRISR---QLQNLCCKIFQNSGRINCCRSSYAPVACCPIL 76
+SSN L V + +F R +R Q Q LCC++ Q GR RS + C +
Sbjct: 257 LSSNRVLPVKLAAARTLCVFIRYNRRYEQRQELCCRLIQECGRGKSYRSRLLFIDICKFI 316
>SB_16639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 271 QLSLAEASSHTYTNLSLERKAVLVHPFNFKL*DDKIIL 384
Q +L S +T+ ++LER +++PF KL K+++
Sbjct: 115 QDALVSVSVYTFVVIALERYRAIINPFKPKLSKSKVLI 152
>SB_25269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = -1
Query: 428 GDDLCRCVTTAGIKCSIILSSHNLKLNGCTRTAFLSNERFVYVWDDAS---ASDSCFYE 261
G CR + T G +C ++ S K N C F + F + +A DSC E
Sbjct: 632 GSITCRIIKTVGDRCLDLVPSRIFKHNSCGIALFQNTYMFFFEGSNADCFPVHDSCAKE 690
>SB_27184| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-05)
Length = 170
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 280 LAEASSHTYTNLSLERKAVLVHP--FNFKL*DDKI 378
L ASS T T L++ER +VHP FKL D +
Sbjct: 91 LTTASSFTLTVLAVERYQAIVHPMCMRFKLRDGAV 125
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 100 RVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELTAS*KQLS 279
RV + V++ A+ + +V + + + V + HL++ D+E + K LS
Sbjct: 620 RVIGSCHVWARALEDSFLKQVWHMPWSTIRSKSVLVLDLGHLKIKSDPDQERVITTKNLS 679
Query: 280 LAEASSHTYT--NLSLERKAVLV 342
+AE S Y ++ LE+ VL+
Sbjct: 680 MAELESKCYDKFDIRLEQLQVLL 702
>SB_22486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 283 AEASSHTYTNLSLERKAVLVHPFNFKL 363
A ++S T T LSL+R V++HPF +L
Sbjct: 118 ATSASLTLTVLSLDRYRVIMHPFQERL 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,923,784
Number of Sequences: 59808
Number of extensions: 441855
Number of successful extensions: 1135
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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