Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0154
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 139 2e-33
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 99 3e-21
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 99 3e-21
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 99 3e-21
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 99 3e-21
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 99 3e-21
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 99 3e-21
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 99 3e-21
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 99 3e-21
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 99 3e-21
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 99 3e-21
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 99 3e-21
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 84 8e-17
AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical ... 28 7.3
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 139 bits (336), Expect = 2e-33
Identities = 69/73 (94%), Positives = 69/73 (94%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGRIHR LK RTTS GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP
Sbjct: 27 GLQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 86
Query: 217 RHLQLAIRGDEEL 255
RHL LAIRGDEEL
Sbjct: 87 RHLHLAIRGDEEL 99
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 252 IDSLIKATIAGGGVIPHIHKSLIGKKGGP 338
+D+LIKATIAGGGVIPHIH+ L+ KKG P
Sbjct: 99 LDTLIKATIAGGGVIPHIHRYLMNKKGAP 127
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GLQFPVGR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI P
Sbjct: 24 GLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAP 82
Query: 217 RHLQLAIRGDEEL 255
RHLQLA+R DEEL
Sbjct: 83 RHLQLAVRNDEEL 95
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +1
Query: 37 GLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 216
GL FPVGRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K R+TP
Sbjct: 35 GLTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTP 94
Query: 217 RHLQLAIRGDEE 252
RHL LAI GD+E
Sbjct: 95 RHLHLAIYGDQE 106
>AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical
protein C53D5.2 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 272 CFYEAVNSSSPLIASCKCRGVIRFTFKS 189
C S+PLI+ C+C G + F K+
Sbjct: 20 CHTSTSTRSNPLISPCRCSGTLLFVHKA 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,830
Number of Sequences: 27780
Number of extensions: 330261
Number of successful extensions: 820
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -