Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0153
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-P...    36   1.2  
UniRef50_A0C5K8 Cluster: Chromosome undetermined scaffold_150, w...    33   8.7  
UniRef50_Q6FU90 Cluster: Similar to tr|Q03466 Saccharomyces cere...    33   8.7  

>UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 551

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 284 VNFGNRYSDMXNKRTESTRSKLSXIIQCSCTTDFWVQHSH*KTQGNLATSNEVSQLL*IT 463
           + F ++  D  N R E    K+  ++    TTD  V     +T GN+  ++E+   + + 
Sbjct: 204 LEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSRTMGNVFATDEILSTI-MC 262

Query: 464 CDRKNYSYPKLI 499
           C R NYS+  ++
Sbjct: 263 CTRSNYSWDVVV 274


>UniRef50_A0C5K8 Cluster: Chromosome undetermined scaffold_150,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_150,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 846

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +1

Query: 37  FKLY*PYVFDFYNTRKNYMSVRKSLKYGLNYNDYVPSILHNLMLNRCL---S*SSLQHYL 207
           FK Y     +     +NY  +  ++K+  N+ND+V  IL+N+  N+       SS++ Y 
Sbjct: 316 FKFYESIYAEGMKILENYNKMENTIKF--NFNDFVTIILYNIFNNKTFKWNQLSSIKDYR 373

Query: 208 PTFAGVRHPKSLKKCNIF 261
            ++A  + P SL +  ++
Sbjct: 374 ASWASYQ-PNSLTRIPVY 390


>UniRef50_Q6FU90 Cluster: Similar to tr|Q03466 Saccharomyces
           cerevisiae YDR206w EBS1; n=1; Candida glabrata|Rep:
           Similar to tr|Q03466 Saccharomyces cerevisiae YDR206w
           EBS1 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 1023

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 52  PYVFDFYNTRKNYM-SVRKSLKYGLNYNDYVPSILHNLMLNRCL 180
           P VF F+N +K    ++ K L+  L YND + +I+  L+L+RC+
Sbjct: 164 PQVFVFFNLKKKAAKALPKKLRLSLKYNDPLANIV-RLVLHRCI 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,590,913
Number of Sequences: 1657284
Number of extensions: 10724195
Number of successful extensions: 20406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20402
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)