Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0153
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 115 YGLNYNDYVPSILHNLMLNRC 177
           Y  N   +  SI HNL LN+C
Sbjct: 120 YRENKQGWQNSIRHNLSLNKC 140


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 368 SIELXSLVWILCSRFACYXYHC 303
           S+     +W+ CS F    +HC
Sbjct: 404 SVNAGMWMWLSCSSFFQQFFHC 425


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 295  SKINVCTTVKLEIYYIF 245
            SKI +C  V L   Y+F
Sbjct: 1119 SKIRICWNVLLNCVYLF 1135


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 124 NYNDYVPSIL-HNLMLNRCL 180
           N+N Y+P+IL +N  ++R L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 124 NYNDYVPSIL-HNLMLNRCL 180
           N+N Y+P+IL +N  ++R L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 124 NYNDYVPSIL-HNLMLNRCL 180
           N+N Y+P+IL +N  ++R L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,414
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)