Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0153
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119516-1|AAM50170.1|  551|Drosophila melanogaster GH14470p pro...    36   0.069
AE014297-1458|AAF54756.1|  551|Drosophila melanogaster CG4810-PA...    36   0.069
AY118478-1|AAM49847.1|  214|Drosophila melanogaster GM16226p pro...    31   1.1  
AE014134-2965|AAF53695.1|  214|Drosophila melanogaster CG10343-P...    31   1.1  

>AY119516-1|AAM50170.1|  551|Drosophila melanogaster GH14470p
           protein.
          Length = 551

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 284 VNFGNRYSDMXNKRTESTRSKLSXIIQCSCTTDFWVQHSH*KTQGNLATSNEVSQLL*IT 463
           + F ++  D  N R E    K+  ++    TTD  V     +T GN+  ++E+   + + 
Sbjct: 204 LEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSRTMGNVFATDEILSTI-MC 262

Query: 464 CDRKNYSYPKLI 499
           C R NYS+  ++
Sbjct: 263 CTRSNYSWDVVV 274


>AE014297-1458|AAF54756.1|  551|Drosophila melanogaster CG4810-PA
           protein.
          Length = 551

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 284 VNFGNRYSDMXNKRTESTRSKLSXIIQCSCTTDFWVQHSH*KTQGNLATSNEVSQLL*IT 463
           + F ++  D  N R E    K+  ++    TTD  V     +T GN+  ++E+   + + 
Sbjct: 204 LEFYDKLYDRVNLRNEKPLQKMDRVVHTVTTTDDPVIRRLSRTMGNVFATDEILSTI-MC 262

Query: 464 CDRKNYSYPKLI 499
           C R NYS+  ++
Sbjct: 263 CTRSNYSWDVVV 274


>AY118478-1|AAM49847.1|  214|Drosophila melanogaster GM16226p
           protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 70  YNTRKNYMSVRKSLKYGLNYNDYVPSILHNLMLNRCL 180
           Y    NY S    LK+G NY D  P+I  N   NR L
Sbjct: 37  YGEEDNYKSFLVELKWGENYPDEAPAINMNAFYNRNL 73


>AE014134-2965|AAF53695.1|  214|Drosophila melanogaster CG10343-PA
           protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 70  YNTRKNYMSVRKSLKYGLNYNDYVPSILHNLMLNRCL 180
           Y    NY S    LK+G NY D  P+I  N   NR L
Sbjct: 37  YGEEDNYKSFLVELKWGENYPDEAPAINMNAFYNRNL 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,544,856
Number of Sequences: 53049
Number of extensions: 499941
Number of successful extensions: 795
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)