Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0153
(689 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 26 0.39
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.2
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.6
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 3.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 4.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.4
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.8 bits (54), Expect = 0.39
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 64 DFYNTRKNYMSVRKSLKYGLNYNDYVP 144
++ N NY + K L Y +NY + +P
Sbjct: 93 NYNNYNNNYNNYNKKLYYNINYIEQIP 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 64 DFYNTRKNYMSVRKSLKYGLNYNDYVP 144
++ N NY + K L Y +NY + +P
Sbjct: 336 NYNNYNNNYNNNYKKLYYNINYIEQIP 362
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 464 CDRKNYSYPKLITTNLKNFEKLYPRIII 547
CDRK+ S K+I + + + K + I+
Sbjct: 6 CDRKSLSQRKIIRSRSRRYSKRFSSSIV 33
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 182 AEVHYNTTYLHLPVLGIQN 238
A V Y + + H+PV+GI +
Sbjct: 112 AAVSYTSGFYHIPVIGISS 130
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 55 YVFDFYNTRKNYMSVRKSLKYGLNYNDYVP 144
Y +++ N NY + K L Y +NY + +P
Sbjct: 96 YKYNYNNN--NYNNNCKKLYYNINYIEQIP 123
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 55 YVFDFYNTRKNYMSVRKSLKYGLNYNDYVP 144
Y +++ N NY + K L Y +NY + +P
Sbjct: 96 YKYNYNNN--NYNNNCKKLYYNINYIEQIP 123
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 55 YVFDFYNTRKNYMSVRKSLKYGLNYNDYVP 144
Y +++ N NY + K L Y +NY + +P
Sbjct: 96 YKYNYNNN--NYNNNCKKLYYNINYIEQIP 123
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 55 YVFDFYNTRKNYMSVRKSLKYGLNYNDYVP 144
Y +++ N NY + K L Y +NY + +P
Sbjct: 96 YKYNYNNN--NYNNNCKKLYYNINYIEQIP 123
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 287 NFGNRYSDMXNKRTESTRSKLSXII 361
NF N+Y EST +K++ I+
Sbjct: 105 NFANKYCGNITLNIESTSNKMTVIL 129
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 111 KTLPDGHIVFTSIIK 67
K LPDG +V TS+ K
Sbjct: 566 KVLPDGTLVITSVQK 580
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 111 KTLPDGHIVFTSIIK 67
K LPDG +V TS+ K
Sbjct: 566 KVLPDGTLVITSVQK 580
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -1
Query: 368 SIELXSLVWILCSRFACYXYHC 303
S+ +W+ CS F +HC
Sbjct: 408 SVNAGMWMWLSCSSFFQQFFHC 429
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 440 PRCSLPNYPVFFSVNVAPKSLLY 372
P C P +FF++ + K+L Y
Sbjct: 216 PCCDEPYPDIFFNITLRRKTLFY 238
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 326 NYNNNYKPLHYNINYIEQIP 345
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 93 NYNNNYKPLYYNINYIEQIP 112
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 93 NYNNNYKPLYYNINYIEQIP 112
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 93 NYNNNYKPLYYNINYIEQIP 112
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 93 NYNNNYKPLYYNINYIEQIP 112
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 326 NYNNNYKPLYYNINYIEQIP 345
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 326 NYNNNYKPLYYNINYIEQIP 345
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 326 NYNNNYKPLYYNINYIEQIP 345
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 85 NYMSVRKSLKYGLNYNDYVP 144
NY + K L Y +NY + +P
Sbjct: 315 NYNNNYKPLYYNINYIEQIP 334
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,121
Number of Sequences: 438
Number of extensions: 3816
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -