Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0152
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003C0456 Cluster: PREDICTED: similar to CG7601-PA ...    40   0.045
UniRef50_Q9Y140 Cluster: CG7601-PA; n=5; Endopterygota|Rep: CG76...    37   0.42 
UniRef50_A2FS53 Cluster: Ankyrin repeat protein, putative; n=1; ...    35   2.2  
UniRef50_Q3YSR6 Cluster: 3-phosphoshikimate 1-carboxyvinyl trans...    34   3.9  
UniRef50_A0Q6Z6 Cluster: Short chain dehydrogenase; n=6; Francis...    33   5.2  
UniRef50_UPI0000498BBC Cluster: conserved hypothetical protein; ...    33   6.8  
UniRef50_A6P224 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_A4AUQ8 Cluster: Putative 3-oxoacyl-[acyl-carrier protei...    33   9.0  
UniRef50_Q9LHF5 Cluster: Emb|CAB52464.1; n=1; Arabidopsis thalia...    33   9.0  
UniRef50_A7TH79 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_UPI00003C0456 Cluster: PREDICTED: similar to CG7601-PA
           isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG7601-PA isoform 1 - Apis mellifera
          Length = 317

 Score = 40.3 bits (90), Expect = 0.045
 Identities = 17/46 (36%), Positives = 30/46 (65%)
 Frame = +1

Query: 490 LIYTILAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNN 627
           L+ T + + T  PVVL +++ +I+N+   + K+  I G +DIL+NN
Sbjct: 91  LMNTHVTVPTYPPVVLPIDITNINNLQTEITKIIDIHGRIDILINN 136


>UniRef50_Q9Y140 Cluster: CG7601-PA; n=5; Endopterygota|Rep:
           CG7601-PA - Drosophila melanogaster (Fruit fly)
          Length = 326

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +1

Query: 526 PVVLELNLADIDNMYLFVEKVYGICGHVDILVNNG 630
           P VL L+LA+++++  FV +V  +   VDIL+NNG
Sbjct: 108 PTVLPLDLAELNSIPEFVTRVLAVYNQVDILINNG 142


>UniRef50_A2FS53 Cluster: Ankyrin repeat protein, putative; n=1;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 1237

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 393 IKFNI*VKHGGTNTILNCSSGFPVTQRLLMSINDDDYLPL 274
           IK N   K+G T+  ++C  G+P    LL+S N D  +P+
Sbjct: 813 IKINYRRKNGSTSLFISCQQGYPDIVSLLLSYNADPNIPI 852


>UniRef50_Q3YSR6 Cluster: 3-phosphoshikimate 1-carboxyvinyl
           transferase; n=5; canis group|Rep: 3-phosphoshikimate
           1-carboxyvinyl transferase - Ehrlichia canis (strain
           Jake)
          Length = 428

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 565 MYLFVEKVYGICGHVDILVNNGRCHS 642
           M L  EK+Y +CGHVDIL +N   H+
Sbjct: 1   MVLISEKIYHMCGHVDILKDNLMSHA 26


>UniRef50_A0Q6Z6 Cluster: Short chain dehydrogenase; n=6;
           Francisella tularensis|Rep: Short chain dehydrogenase -
           Francisella tularensis subsp. novicida (strain U112)
          Length = 287

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 529 VVLELNLADIDNMYLFVEKVYGICGHVDILVNN 627
           + +E+ L + D    F++KVY   G +DIL+NN
Sbjct: 95  LAVEVELKNYDQCKEFIDKVYNYFGRIDILINN 127


>UniRef50_UPI0000498BBC Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 298

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 541 LNLADIDNMYLFVEKVYGICGHVDILVNNGRC 636
           L+L+D++ +   V++++ +  H+DIL+NN  C
Sbjct: 81  LDLSDLNKVKETVKEIHSVIDHIDILINNAGC 112


>UniRef50_A6P224 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 234

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +1

Query: 544 NLADIDNMYLFVEKVYGICGHVDILVNN 627
           NLAD   +  F  KV   CGHVD LVNN
Sbjct: 45  NLADQTVLEDFARKVIDDCGHVDFLVNN 72


>UniRef50_A4AUQ8 Cluster: Putative 3-oxoacyl-[acyl-carrier protein]
           reductase; n=1; Flavobacteriales bacterium HTCC2170|Rep:
           Putative 3-oxoacyl-[acyl-carrier protein] reductase -
           Flavobacteriales bacterium HTCC2170
          Length = 264

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 529 VVLELNLADIDNMYLFVEKVYGICGHVDILVNN 627
           +VL L+L D ++M + V++     G +DILVNN
Sbjct: 57  IVLPLDLGDFESMVIRVKEALSFFGPIDILVNN 89


>UniRef50_Q9LHF5 Cluster: Emb|CAB52464.1; n=1; Arabidopsis
           thaliana|Rep: Emb|CAB52464.1 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 602

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 51  SDYTEFNCITHLALFCSSNSLKYGII--GNELKLAGCWYIYPCG 176
           SD  EF C     + C+   +K G+I  GN +KL GC+  Y CG
Sbjct: 93  SDDVEF-CGLSCHIECAFREVKVGVIALGNLMKLDGCFCCYSCG 135


>UniRef50_A7TH79 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 1565

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 496 YTILAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNN 627
           Y+I      +P +   N+ D+DNM   ++K YGI    DI+ N+
Sbjct: 201 YSIYDQLEFDPKIFPNNIEDVDNMVKRLQKDYGILSLTDIVFNH 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,768,985
Number of Sequences: 1657284
Number of extensions: 14591463
Number of successful extensions: 26579
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26573
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)